Protein–RNA interactions for Protein: Q8NFH5

NUP35, Nucleoporin NUP53, humanhuman

Predictions only

Length 326 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP35Q8NFH5 TRPM2-204ENST00000397932 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
NUP35Q8NFH5 FIG4-201ENST00000230124 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
NUP35Q8NFH5 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC11.56□□□□□ -0.56
NUP35Q8NFH5 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC11.56□□□□□ -0.56
NUP35Q8NFH5 TET3-201ENST00000305799 5174 ntTSL 5 BASIC11.56□□□□□ -0.56
NUP35Q8NFH5 NRIP3-201ENST00000309166 3809 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
NUP35Q8NFH5 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC11.56□□□□□ -0.56
NUP35Q8NFH5 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
NUP35Q8NFH5 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
NUP35Q8NFH5 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
NUP35Q8NFH5 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
NUP35Q8NFH5 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
NUP35Q8NFH5 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC11.56□□□□□ -0.56
NUP35Q8NFH5 IGHV3-65-201ENST00000523210 341 ntBASIC11.56□□□□□ -0.56
NUP35Q8NFH5 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC11.56□□□□□ -0.56
NUP35Q8NFH5 CIPC-205ENST00000555437 566 ntTSL 3 BASIC11.56□□□□□ -0.56
NUP35Q8NFH5 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
NUP35Q8NFH5 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC11.56□□□□□ -0.56
NUP35Q8NFH5 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC11.56□□□□□ -0.56
NUP35Q8NFH5 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC11.56□□□□□ -0.56
NUP35Q8NFH5 RN7SL850P-201ENST00000579959 291 ntBASIC11.56□□□□□ -0.56
NUP35Q8NFH5 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC11.56□□□□□ -0.56
NUP35Q8NFH5 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC11.56□□□□□ -0.56
NUP35Q8NFH5 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC11.56□□□□□ -0.56
NUP35Q8NFH5 AL355877.3-201ENST00000622820 899 ntBASIC11.56□□□□□ -0.56
NUP35Q8NFH5 AC130686.1-201ENST00000622936 2466 ntBASIC11.56□□□□□ -0.56
NUP35Q8NFH5 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC11.56□□□□□ -0.56
NUP35Q8NFH5 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC11.56□□□□□ -0.56
NUP35Q8NFH5 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
NUP35Q8NFH5 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
NUP35Q8NFH5 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
NUP35Q8NFH5 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
NUP35Q8NFH5 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
NUP35Q8NFH5 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC11.56□□□□□ -0.56
NUP35Q8NFH5 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
NUP35Q8NFH5 STK3-201ENST00000419617 2826 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
NUP35Q8NFH5 MGC16275-201ENST00000499670 2501 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
NUP35Q8NFH5 CPA5-205ENST00000466363 2099 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
NUP35Q8NFH5 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
NUP35Q8NFH5 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
NUP35Q8NFH5 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
NUP35Q8NFH5 MAPT-IT1-201ENST00000624111 3016 ntBASIC11.56□□□□□ -0.56
NUP35Q8NFH5 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
NUP35Q8NFH5 AC138969.3-201ENST00000546612 1459 ntBASIC11.56□□□□□ -0.56
NUP35Q8NFH5 AC138932.2-201ENST00000548268 1459 ntBASIC11.56□□□□□ -0.56
NUP35Q8NFH5 AC126755.4-201ENST00000549796 1459 ntBASIC11.56□□□□□ -0.56
NUP35Q8NFH5 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC11.56□□□□□ -0.56
NUP35Q8NFH5 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC11.56□□□□□ -0.56
NUP35Q8NFH5 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
NUP35Q8NFH5 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
NUP35Q8NFH5 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
NUP35Q8NFH5 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
NUP35Q8NFH5 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
NUP35Q8NFH5 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC11.55□□□□□ -0.56
NUP35Q8NFH5 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
NUP35Q8NFH5 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC11.55□□□□□ -0.56
NUP35Q8NFH5 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
NUP35Q8NFH5 GDPD2-204ENST00000536730 2171 ntTSL 2 BASIC11.55□□□□□ -0.56
NUP35Q8NFH5 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC11.55□□□□□ -0.56
NUP35Q8NFH5 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
NUP35Q8NFH5 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC11.55□□□□□ -0.56
NUP35Q8NFH5 SLC6A6P1-201ENST00000413933 1850 ntBASIC11.55□□□□□ -0.56
NUP35Q8NFH5 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
NUP35Q8NFH5 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
NUP35Q8NFH5 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
NUP35Q8NFH5 FAM213A-205ENST00000606162 5859 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
NUP35Q8NFH5 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
NUP35Q8NFH5 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
NUP35Q8NFH5 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC11.55□□□□□ -0.56
NUP35Q8NFH5 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
NUP35Q8NFH5 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC11.55□□□□□ -0.56
NUP35Q8NFH5 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
NUP35Q8NFH5 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
NUP35Q8NFH5 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
NUP35Q8NFH5 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
NUP35Q8NFH5 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
NUP35Q8NFH5 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC11.55□□□□□ -0.56
NUP35Q8NFH5 AC055811.4-201ENST00000624039 1754 ntBASIC11.55□□□□□ -0.56
NUP35Q8NFH5 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
NUP35Q8NFH5 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
NUP35Q8NFH5 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC11.55□□□□□ -0.56
NUP35Q8NFH5 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
NUP35Q8NFH5 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
NUP35Q8NFH5 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
NUP35Q8NFH5 MRPL20P1-201ENST00000400819 433 ntBASIC11.55□□□□□ -0.56
NUP35Q8NFH5 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC11.55□□□□□ -0.56
NUP35Q8NFH5 GHSR-202ENST00000427970 912 ntBASIC11.55□□□□□ -0.56
NUP35Q8NFH5 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
NUP35Q8NFH5 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC11.55□□□□□ -0.56
NUP35Q8NFH5 AC109635.5-201ENST00000533593 962 ntBASIC11.55□□□□□ -0.56
NUP35Q8NFH5 OR7E47P-204ENST00000575924 449 ntBASIC11.55□□□□□ -0.56
NUP35Q8NFH5 MIR3180-1-201ENST00000580374 94 ntBASIC11.55□□□□□ -0.56
NUP35Q8NFH5 MIR3180-3-201ENST00000584616 94 ntBASIC11.55□□□□□ -0.56
NUP35Q8NFH5 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC11.55□□□□□ -0.56
NUP35Q8NFH5 MAGI1-218ENST00000621418 6225 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
NUP35Q8NFH5 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
NUP35Q8NFH5 AMT-224ENST00000635808 1610 ntTSL 5 BASIC11.55□□□□□ -0.56
NUP35Q8NFH5 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC11.55□□□□□ -0.56
NUP35Q8NFH5 LINC02346-201ENST00000383019 1967 ntTSL 2 BASIC11.55□□□□□ -0.56
NUP35Q8NFH5 ATP13A1-202ENST00000357324 3861 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms