Protein–RNA interactions for Protein: Q8NDH2

CCDC168, Coiled-coil domain-containing protein 168, humanhuman

Predictions only

Length 2,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC168Q8NDH2 AC136759.1-202ENST00000530858 2194 ntBASIC12.73□□□□□ -0.37
CCDC168Q8NDH2 CEP128-201ENST00000216517 1606 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CCDC168Q8NDH2 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CCDC168Q8NDH2 NID2-208ENST00000617139 3827 ntTSL 5 BASIC12.73□□□□□ -0.37
CCDC168Q8NDH2 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CCDC168Q8NDH2 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CCDC168Q8NDH2 GPT2-201ENST00000340124 3984 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CCDC168Q8NDH2 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC12.73□□□□□ -0.37
CCDC168Q8NDH2 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CCDC168Q8NDH2 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CCDC168Q8NDH2 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC12.73□□□□□ -0.37
CCDC168Q8NDH2 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CCDC168Q8NDH2 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC12.73□□□□□ -0.37
CCDC168Q8NDH2 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC12.73□□□□□ -0.37
CCDC168Q8NDH2 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC12.72□□□□□ -0.37
CCDC168Q8NDH2 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC12.72□□□□□ -0.37
CCDC168Q8NDH2 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC12.72□□□□□ -0.37
CCDC168Q8NDH2 PIGL-201ENST00000225609 1137 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CCDC168Q8NDH2 CCDC167-201ENST00000373408 619 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CCDC168Q8NDH2 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CCDC168Q8NDH2 C1QA-202ENST00000402322 976 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CCDC168Q8NDH2 AC012442.2-201ENST00000414784 425 ntTSL 2 BASIC12.72□□□□□ -0.37
CCDC168Q8NDH2 AL627422.1-201ENST00000434104 580 ntBASIC12.72□□□□□ -0.37
CCDC168Q8NDH2 SUMF2-210ENST00000437307 947 ntTSL 2 BASIC12.72□□□□□ -0.37
CCDC168Q8NDH2 AC004869.1-201ENST00000440935 540 ntTSL 4 BASIC12.72□□□□□ -0.37
CCDC168Q8NDH2 LYPLA2P1-203ENST00000447689 696 ntBASIC12.72□□□□□ -0.37
CCDC168Q8NDH2 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC12.72□□□□□ -0.37
CCDC168Q8NDH2 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC12.72□□□□□ -0.37
CCDC168Q8NDH2 AC009779.1-201ENST00000551138 283 ntBASIC12.72□□□□□ -0.37
CCDC168Q8NDH2 RPS15-202ENST00000585665 467 ntTSL 3 BASIC12.72□□□□□ -0.37
CCDC168Q8NDH2 AL157813.1-201ENST00000612996 587 ntBASIC12.72□□□□□ -0.37
CCDC168Q8NDH2 SLC12A5-216ENST00000626701 617 ntTSL 3 BASIC12.72□□□□□ -0.37
CCDC168Q8NDH2 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
CCDC168Q8NDH2 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CCDC168Q8NDH2 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC12.72□□□□□ -0.37
CCDC168Q8NDH2 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC12.72□□□□□ -0.37
CCDC168Q8NDH2 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CCDC168Q8NDH2 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CCDC168Q8NDH2 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
CCDC168Q8NDH2 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CCDC168Q8NDH2 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC12.72□□□□□ -0.37
CCDC168Q8NDH2 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC12.72□□□□□ -0.37
CCDC168Q8NDH2 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CCDC168Q8NDH2 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC12.72□□□□□ -0.37
CCDC168Q8NDH2 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
CCDC168Q8NDH2 HR-201ENST00000312841 5351 ntTSL 5 BASIC12.72□□□□□ -0.37
CCDC168Q8NDH2 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CCDC168Q8NDH2 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CCDC168Q8NDH2 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC12.72□□□□□ -0.37
CCDC168Q8NDH2 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
CCDC168Q8NDH2 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC12.72□□□□□ -0.37
CCDC168Q8NDH2 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
CCDC168Q8NDH2 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC12.72□□□□□ -0.37
CCDC168Q8NDH2 AL357563.1-201ENST00000404728 395 ntBASIC12.72□□□□□ -0.37
CCDC168Q8NDH2 DCST1-AS1-201ENST00000452962 822 ntTSL 2 BASIC12.72□□□□□ -0.37
CCDC168Q8NDH2 NUDT4P2-201ENST00000578341 546 ntBASIC12.72□□□□□ -0.37
CCDC168Q8NDH2 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC12.72□□□□□ -0.37
CCDC168Q8NDH2 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
CCDC168Q8NDH2 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
CCDC168Q8NDH2 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC12.72□□□□□ -0.37
CCDC168Q8NDH2 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CCDC168Q8NDH2 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
CCDC168Q8NDH2 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC12.72□□□□□ -0.37
CCDC168Q8NDH2 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CCDC168Q8NDH2 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CCDC168Q8NDH2 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CCDC168Q8NDH2 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
CCDC168Q8NDH2 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
CCDC168Q8NDH2 AC005392.1-201ENST00000419624 500 ntTSL 5 BASIC12.71□□□□□ -0.37
CCDC168Q8NDH2 HCG27-204ENST00000424675 895 ntTSL 3 BASIC12.71□□□□□ -0.37
CCDC168Q8NDH2 RHBDD2-203ENST00000428119 1274 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
CCDC168Q8NDH2 LINC01278-201ENST00000433061 529 ntTSL 3 BASIC12.71□□□□□ -0.37
CCDC168Q8NDH2 HLA-DQB2-232ENST00000437316 1214 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
CCDC168Q8NDH2 AC244197.1-201ENST00000456494 951 ntBASIC12.71□□□□□ -0.37
CCDC168Q8NDH2 NDUFS6P1-201ENST00000485187 316 ntBASIC12.71□□□□□ -0.37
CCDC168Q8NDH2 SDHAF2-206ENST00000542074 835 ntTSL 2 BASIC12.71□□□□□ -0.37
CCDC168Q8NDH2 INCA1-203ENST00000575780 1221 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
CCDC168Q8NDH2 LINC01278-206ENST00000610088 554 ntTSL 4 BASIC12.71□□□□□ -0.37
CCDC168Q8NDH2 AC106774.7-201ENST00000638408 597 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
CCDC168Q8NDH2 AC106774.6-201ENST00000638483 597 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
CCDC168Q8NDH2 AC233724.20-201ENST00000638842 597 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
CCDC168Q8NDH2 AC233724.19-201ENST00000639969 597 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
CCDC168Q8NDH2 AC106774.5-201ENST00000640558 597 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
CCDC168Q8NDH2 AC233724.18-201ENST00000640803 597 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
CCDC168Q8NDH2 AC233724.21-201ENST00000640846 597 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
CCDC168Q8NDH2 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
CCDC168Q8NDH2 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
CCDC168Q8NDH2 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
CCDC168Q8NDH2 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
CCDC168Q8NDH2 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC12.71□□□□□ -0.37
CCDC168Q8NDH2 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
CCDC168Q8NDH2 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC12.71□□□□□ -0.37
CCDC168Q8NDH2 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
CCDC168Q8NDH2 Z84468.1-201ENST00000626321 1408 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
CCDC168Q8NDH2 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC12.71□□□□□ -0.37
CCDC168Q8NDH2 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC12.71□□□□□ -0.37
CCDC168Q8NDH2 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC12.71□□□□□ -0.37
CCDC168Q8NDH2 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
CCDC168Q8NDH2 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC12.71□□□□□ -0.37
CCDC168Q8NDH2 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms