Protein–RNA interactions for Protein: Q8N5M4

TTC9C, Tetratricopeptide repeat protein 9C, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9CQ8N5M4 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC12.22□□□□□ -0.45
TTC9CQ8N5M4 GHSR-202ENST00000427970 912 ntBASIC12.22□□□□□ -0.45
TTC9CQ8N5M4 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC12.22□□□□□ -0.45
TTC9CQ8N5M4 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC12.22□□□□□ -0.45
TTC9CQ8N5M4 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC12.22□□□□□ -0.45
TTC9CQ8N5M4 RFPL4AP1-201ENST00000530883 850 ntBASIC12.22□□□□□ -0.45
TTC9CQ8N5M4 AC135586.1-201ENST00000539323 574 ntBASIC12.22□□□□□ -0.45
TTC9CQ8N5M4 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC12.22□□□□□ -0.45
TTC9CQ8N5M4 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC12.22□□□□□ -0.45
TTC9CQ8N5M4 DUT-210ENST00000559935 569 ntTSL 3 BASIC12.22□□□□□ -0.45
TTC9CQ8N5M4 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
TTC9CQ8N5M4 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC12.22□□□□□ -0.45
TTC9CQ8N5M4 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC12.22□□□□□ -0.45
TTC9CQ8N5M4 SRD5A3P1-201ENST00000603021 949 ntBASIC12.22□□□□□ -0.45
TTC9CQ8N5M4 AC025181.2-201ENST00000606994 802 ntBASIC12.22□□□□□ -0.45
TTC9CQ8N5M4 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC12.22□□□□□ -0.45
TTC9CQ8N5M4 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
TTC9CQ8N5M4 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
TTC9CQ8N5M4 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
TTC9CQ8N5M4 TNIK-204ENST00000436636 6970 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
TTC9CQ8N5M4 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
TTC9CQ8N5M4 TP73-209ENST00000603362 1668 ntTSL 5 BASIC12.22□□□□□ -0.45
TTC9CQ8N5M4 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
TTC9CQ8N5M4 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
TTC9CQ8N5M4 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
TTC9CQ8N5M4 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
TTC9CQ8N5M4 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC12.21□□□□□ -0.45
TTC9CQ8N5M4 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
TTC9CQ8N5M4 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC12.21□□□□□ -0.45
TTC9CQ8N5M4 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC12.21□□□□□ -0.45
TTC9CQ8N5M4 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC12.21□□□□□ -0.45
TTC9CQ8N5M4 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
TTC9CQ8N5M4 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
TTC9CQ8N5M4 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC12.21□□□□□ -0.45
TTC9CQ8N5M4 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
TTC9CQ8N5M4 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
TTC9CQ8N5M4 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC12.21□□□□□ -0.45
TTC9CQ8N5M4 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
TTC9CQ8N5M4 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
TTC9CQ8N5M4 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC12.21□□□□□ -0.45
TTC9CQ8N5M4 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
TTC9CQ8N5M4 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
TTC9CQ8N5M4 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
TTC9CQ8N5M4 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC12.21□□□□□ -0.45
TTC9CQ8N5M4 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC12.21□□□□□ -0.45
TTC9CQ8N5M4 FAM8A3P-201ENST00000427218 844 ntBASIC12.21□□□□□ -0.45
TTC9CQ8N5M4 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
TTC9CQ8N5M4 PFN2-205ENST00000461868 613 ntTSL 2 BASIC12.21□□□□□ -0.45
TTC9CQ8N5M4 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC12.21□□□□□ -0.45
TTC9CQ8N5M4 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC12.21□□□□□ -0.45
TTC9CQ8N5M4 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC12.21□□□□□ -0.45
TTC9CQ8N5M4 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC12.21□□□□□ -0.45
TTC9CQ8N5M4 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
TTC9CQ8N5M4 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC12.21□□□□□ -0.45
TTC9CQ8N5M4 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC12.21□□□□□ -0.45
TTC9CQ8N5M4 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC12.21□□□□□ -0.45
TTC9CQ8N5M4 AL390955.2-201ENST00000603032 514 ntBASIC12.21□□□□□ -0.45
TTC9CQ8N5M4 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC12.21□□□□□ -0.45
TTC9CQ8N5M4 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC12.21□□□□□ -0.45
TTC9CQ8N5M4 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
TTC9CQ8N5M4 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC12.21□□□□□ -0.45
TTC9CQ8N5M4 DKFZP434A062-201ENST00000573103 5021 ntBASIC12.21□□□□□ -0.45
TTC9CQ8N5M4 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
TTC9CQ8N5M4 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC12.21□□□□□ -0.45
TTC9CQ8N5M4 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC12.21□□□□□ -0.46
TTC9CQ8N5M4 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC12.21□□□□□ -0.46
TTC9CQ8N5M4 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
TTC9CQ8N5M4 CELP-203ENST00000624767 2414 ntTSL 5 BASIC12.21□□□□□ -0.46
TTC9CQ8N5M4 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC12.21□□□□□ -0.46
TTC9CQ8N5M4 POLL-217ENST00000628479 1953 ntTSL 5 BASIC12.21□□□□□ -0.46
TTC9CQ8N5M4 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
TTC9CQ8N5M4 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC12.21□□□□□ -0.46
TTC9CQ8N5M4 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
TTC9CQ8N5M4 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
TTC9CQ8N5M4 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC12.21□□□□□ -0.46
TTC9CQ8N5M4 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
TTC9CQ8N5M4 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
TTC9CQ8N5M4 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.46
TTC9CQ8N5M4 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC12.21□□□□□ -0.46
TTC9CQ8N5M4 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC12.21□□□□□ -0.46
TTC9CQ8N5M4 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC12.21□□□□□ -0.46
TTC9CQ8N5M4 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
TTC9CQ8N5M4 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC12.21□□□□□ -0.46
TTC9CQ8N5M4 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
TTC9CQ8N5M4 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
TTC9CQ8N5M4 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
TTC9CQ8N5M4 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC12.21□□□□□ -0.46
TTC9CQ8N5M4 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
TTC9CQ8N5M4 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
TTC9CQ8N5M4 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC12.21□□□□□ -0.46
TTC9CQ8N5M4 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
TTC9CQ8N5M4 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC12.2□□□□□ -0.46
TTC9CQ8N5M4 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
TTC9CQ8N5M4 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
TTC9CQ8N5M4 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
TTC9CQ8N5M4 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC12.2□□□□□ -0.46
TTC9CQ8N5M4 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
TTC9CQ8N5M4 RERG-209ENST00000546331 1383 ntTSL 2 BASIC12.2□□□□□ -0.46
TTC9CQ8N5M4 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC12.2□□□□□ -0.46
TTC9CQ8N5M4 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms