Protein–RNA interactions for Protein: Q8IYR6

TMEFF1, Tomoregulin-1, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1Q8IYR6 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
TMEFF1Q8IYR6 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TMEFF1Q8IYR6 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TMEFF1Q8IYR6 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
TMEFF1Q8IYR6 KRT8P4-201ENST00000509735 1454 ntBASIC15.22■□□□□ 0.03
TMEFF1Q8IYR6 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TMEFF1Q8IYR6 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TMEFF1Q8IYR6 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC15.22■□□□□ 0.03
TMEFF1Q8IYR6 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TMEFF1Q8IYR6 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TMEFF1Q8IYR6 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TMEFF1Q8IYR6 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TMEFF1Q8IYR6 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TMEFF1Q8IYR6 LINC01806-201ENST00000436506 765 ntTSL 2 BASIC15.22■□□□□ 0.03
TMEFF1Q8IYR6 SERPINA13P-202ENST00000478994 924 ntBASIC15.22■□□□□ 0.03
TMEFF1Q8IYR6 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC15.22■□□□□ 0.03
TMEFF1Q8IYR6 AC004066.1-201ENST00000502488 802 ntBASIC15.22■□□□□ 0.03
TMEFF1Q8IYR6 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC15.22■□□□□ 0.03
TMEFF1Q8IYR6 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC15.22■□□□□ 0.03
TMEFF1Q8IYR6 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC15.22■□□□□ 0.03
TMEFF1Q8IYR6 CU633904.3-201ENST00000624042 1029 ntBASIC15.22■□□□□ 0.03
TMEFF1Q8IYR6 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
TMEFF1Q8IYR6 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC15.22■□□□□ 0.03
TMEFF1Q8IYR6 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
TMEFF1Q8IYR6 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TMEFF1Q8IYR6 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
TMEFF1Q8IYR6 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
TMEFF1Q8IYR6 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TMEFF1Q8IYR6 AC007787.1-201ENST00000588095 1583 ntBASIC15.22■□□□□ 0.03
TMEFF1Q8IYR6 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
TMEFF1Q8IYR6 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TMEFF1Q8IYR6 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
TMEFF1Q8IYR6 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TMEFF1Q8IYR6 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
TMEFF1Q8IYR6 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
TMEFF1Q8IYR6 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TMEFF1Q8IYR6 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TMEFF1Q8IYR6 AC008894.3-201ENST00000624324 3103 ntBASIC15.21■□□□□ 0.03
TMEFF1Q8IYR6 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC15.21■□□□□ 0.03
TMEFF1Q8IYR6 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC15.21■□□□□ 0.03
TMEFF1Q8IYR6 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
TMEFF1Q8IYR6 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TMEFF1Q8IYR6 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TMEFF1Q8IYR6 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TMEFF1Q8IYR6 KRT8P19-201ENST00000551916 1455 ntBASIC15.21■□□□□ 0.03
TMEFF1Q8IYR6 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC15.21■□□□□ 0.03
TMEFF1Q8IYR6 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.03
TMEFF1Q8IYR6 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TMEFF1Q8IYR6 AC026691.1-201ENST00000602502 2017 ntBASIC15.21■□□□□ 0.03
TMEFF1Q8IYR6 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
TMEFF1Q8IYR6 AC091046.1-201ENST00000331871 207 ntBASIC15.21■□□□□ 0.03
TMEFF1Q8IYR6 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TMEFF1Q8IYR6 FXNP2-201ENST00000411625 547 ntBASIC15.21■□□□□ 0.03
TMEFF1Q8IYR6 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC15.21■□□□□ 0.03
TMEFF1Q8IYR6 AL133466.1-201ENST00000447582 150 ntBASIC15.21■□□□□ 0.03
TMEFF1Q8IYR6 SPTLC1P5-201ENST00000450718 252 ntBASIC15.21■□□□□ 0.03
TMEFF1Q8IYR6 MPRIPP1-201ENST00000452433 1089 ntBASIC15.21■□□□□ 0.03
TMEFF1Q8IYR6 ATP6V0CP2-201ENST00000469409 207 ntBASIC15.21■□□□□ 0.03
TMEFF1Q8IYR6 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TMEFF1Q8IYR6 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC15.21■□□□□ 0.03
TMEFF1Q8IYR6 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC15.21■□□□□ 0.03
TMEFF1Q8IYR6 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC15.21■□□□□ 0.03
TMEFF1Q8IYR6 AL603832.2-201ENST00000566195 2125 ntBASIC15.21■□□□□ 0.03
TMEFF1Q8IYR6 RN7SL713P-201ENST00000582127 302 ntBASIC15.21■□□□□ 0.03
TMEFF1Q8IYR6 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC15.21■□□□□ 0.03
TMEFF1Q8IYR6 AP001505.2-201ENST00000616815 443 ntBASIC15.21■□□□□ 0.03
TMEFF1Q8IYR6 SNX1-214ENST00000625244 324 ntTSL 5 BASIC15.21■□□□□ 0.03
TMEFF1Q8IYR6 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC15.21■□□□□ 0.03
TMEFF1Q8IYR6 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
TMEFF1Q8IYR6 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
TMEFF1Q8IYR6 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TMEFF1Q8IYR6 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TMEFF1Q8IYR6 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
TMEFF1Q8IYR6 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
TMEFF1Q8IYR6 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC15.21■□□□□ 0.03
TMEFF1Q8IYR6 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC15.21■□□□□ 0.03
TMEFF1Q8IYR6 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
TMEFF1Q8IYR6 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
TMEFF1Q8IYR6 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.02
TMEFF1Q8IYR6 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.02
TMEFF1Q8IYR6 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
TMEFF1Q8IYR6 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
TMEFF1Q8IYR6 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
TMEFF1Q8IYR6 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
TMEFF1Q8IYR6 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
TMEFF1Q8IYR6 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC15.21■□□□□ 0.02
TMEFF1Q8IYR6 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC15.21■□□□□ 0.02
TMEFF1Q8IYR6 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
TMEFF1Q8IYR6 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC15.2■□□□□ 0.02
TMEFF1Q8IYR6 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TMEFF1Q8IYR6 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TMEFF1Q8IYR6 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
TMEFF1Q8IYR6 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC15.2■□□□□ 0.02
TMEFF1Q8IYR6 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TMEFF1Q8IYR6 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC15.2■□□□□ 0.02
TMEFF1Q8IYR6 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC15.2■□□□□ 0.02
TMEFF1Q8IYR6 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TMEFF1Q8IYR6 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
TMEFF1Q8IYR6 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
TMEFF1Q8IYR6 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 57.9 ms