Protein–RNA interactions for Protein: Q8IV77

CNGA4, Cyclic nucleotide-gated cation channel alpha-4, humanhuman

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA4Q8IV77 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC16.77■□□□□ 0.27
CNGA4Q8IV77 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC16.77■□□□□ 0.27
CNGA4Q8IV77 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CNGA4Q8IV77 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
CNGA4Q8IV77 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
CNGA4Q8IV77 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
CNGA4Q8IV77 AC015656.1-201ENST00000624209 3578 ntBASIC16.77■□□□□ 0.27
CNGA4Q8IV77 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC16.77■□□□□ 0.27
CNGA4Q8IV77 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CNGA4Q8IV77 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
CNGA4Q8IV77 AC136759.1-202ENST00000530858 2194 ntBASIC16.77■□□□□ 0.27
CNGA4Q8IV77 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
CNGA4Q8IV77 AC007787.1-201ENST00000588095 1583 ntBASIC16.77■□□□□ 0.27
CNGA4Q8IV77 KRT8P12-202ENST00000472924 1397 ntBASIC16.77■□□□□ 0.27
CNGA4Q8IV77 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC16.77■□□□□ 0.27
CNGA4Q8IV77 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CNGA4Q8IV77 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC16.76■□□□□ 0.27
CNGA4Q8IV77 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
CNGA4Q8IV77 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC16.76■□□□□ 0.27
CNGA4Q8IV77 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CNGA4Q8IV77 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CNGA4Q8IV77 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CNGA4Q8IV77 AC007326.2-201ENST00000624224 7579 ntBASIC16.76■□□□□ 0.27
CNGA4Q8IV77 LINC01230-201ENST00000625222 3017 ntBASIC16.76■□□□□ 0.27
CNGA4Q8IV77 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
CNGA4Q8IV77 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CNGA4Q8IV77 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CNGA4Q8IV77 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CNGA4Q8IV77 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CNGA4Q8IV77 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
CNGA4Q8IV77 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
CNGA4Q8IV77 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC16.76■□□□□ 0.27
CNGA4Q8IV77 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CNGA4Q8IV77 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CNGA4Q8IV77 AC023274.1-201ENST00000418278 595 ntBASIC16.76■□□□□ 0.27
CNGA4Q8IV77 MCCD1P2-201ENST00000423228 335 ntBASIC16.76■□□□□ 0.27
CNGA4Q8IV77 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC16.76■□□□□ 0.27
CNGA4Q8IV77 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC16.76■□□□□ 0.27
CNGA4Q8IV77 UBL5-208ENST00000593087 320 ntTSL 3 BASIC16.76■□□□□ 0.27
CNGA4Q8IV77 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC16.76■□□□□ 0.27
CNGA4Q8IV77 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
CNGA4Q8IV77 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CNGA4Q8IV77 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC16.76■□□□□ 0.27
CNGA4Q8IV77 POLL-206ENST00000370172 2308 ntTSL 2 BASIC16.76■□□□□ 0.27
CNGA4Q8IV77 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
CNGA4Q8IV77 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CNGA4Q8IV77 AC005840.4-201ENST00000541242 2494 ntBASIC16.76■□□□□ 0.27
CNGA4Q8IV77 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CNGA4Q8IV77 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CNGA4Q8IV77 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CNGA4Q8IV77 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
CNGA4Q8IV77 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CNGA4Q8IV77 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC16.76■□□□□ 0.27
CNGA4Q8IV77 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
CNGA4Q8IV77 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CNGA4Q8IV77 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CNGA4Q8IV77 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC16.76■□□□□ 0.27
CNGA4Q8IV77 AC104581.4-201ENST00000623126 3052 ntBASIC16.76■□□□□ 0.27
CNGA4Q8IV77 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
CNGA4Q8IV77 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CNGA4Q8IV77 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CNGA4Q8IV77 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CNGA4Q8IV77 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CNGA4Q8IV77 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CNGA4Q8IV77 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC16.75■□□□□ 0.27
CNGA4Q8IV77 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CNGA4Q8IV77 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CNGA4Q8IV77 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
CNGA4Q8IV77 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CNGA4Q8IV77 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CNGA4Q8IV77 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CNGA4Q8IV77 BANP-203ENST00000393207 2438 ntTSL 2 BASIC16.75■□□□□ 0.27
CNGA4Q8IV77 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC16.75■□□□□ 0.27
CNGA4Q8IV77 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CNGA4Q8IV77 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC16.75■□□□□ 0.27
CNGA4Q8IV77 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CNGA4Q8IV77 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC16.75■□□□□ 0.27
CNGA4Q8IV77 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CNGA4Q8IV77 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC16.75■□□□□ 0.27
CNGA4Q8IV77 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC16.75■□□□□ 0.27
CNGA4Q8IV77 SLC25A1P1-201ENST00000528351 927 ntBASIC16.75■□□□□ 0.27
CNGA4Q8IV77 ALG1L8P-201ENST00000533887 760 ntBASIC16.75■□□□□ 0.27
CNGA4Q8IV77 LITAF-210ENST00000571976 548 ntTSL 2 BASIC16.75■□□□□ 0.27
CNGA4Q8IV77 LITAF-214ENST00000574703 486 ntTSL 2 BASIC16.75■□□□□ 0.27
CNGA4Q8IV77 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
CNGA4Q8IV77 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC16.75■□□□□ 0.27
CNGA4Q8IV77 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC16.75■□□□□ 0.27
CNGA4Q8IV77 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
CNGA4Q8IV77 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
CNGA4Q8IV77 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CNGA4Q8IV77 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CNGA4Q8IV77 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CNGA4Q8IV77 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
CNGA4Q8IV77 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CNGA4Q8IV77 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CNGA4Q8IV77 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC16.75■□□□□ 0.27
CNGA4Q8IV77 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CNGA4Q8IV77 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC16.75■□□□□ 0.27
CNGA4Q8IV77 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CNGA4Q8IV77 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms