Protein–RNA interactions for Protein: Q8IUI8

CRLF3, Cytokine receptor-like factor 3, humanhuman

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3Q8IUI8 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC15.48■□□□□ 0.07
CRLF3Q8IUI8 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC15.48■□□□□ 0.07
CRLF3Q8IUI8 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC15.48■□□□□ 0.07
CRLF3Q8IUI8 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC15.48■□□□□ 0.07
CRLF3Q8IUI8 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC15.48■□□□□ 0.07
CRLF3Q8IUI8 AC093028.1-201ENST00000622998 982 ntBASIC15.48■□□□□ 0.07
CRLF3Q8IUI8 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
CRLF3Q8IUI8 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CRLF3Q8IUI8 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC15.48■□□□□ 0.07
CRLF3Q8IUI8 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CRLF3Q8IUI8 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CRLF3Q8IUI8 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
CRLF3Q8IUI8 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
CRLF3Q8IUI8 AC126335.2-201ENST00000623362 4637 ntBASIC15.48■□□□□ 0.07
CRLF3Q8IUI8 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
CRLF3Q8IUI8 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC15.48■□□□□ 0.07
CRLF3Q8IUI8 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CRLF3Q8IUI8 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CRLF3Q8IUI8 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC15.48■□□□□ 0.07
CRLF3Q8IUI8 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
CRLF3Q8IUI8 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC15.47■□□□□ 0.07
CRLF3Q8IUI8 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC15.47■□□□□ 0.07
CRLF3Q8IUI8 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
CRLF3Q8IUI8 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
CRLF3Q8IUI8 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
CRLF3Q8IUI8 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CRLF3Q8IUI8 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CRLF3Q8IUI8 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
CRLF3Q8IUI8 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CRLF3Q8IUI8 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CRLF3Q8IUI8 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
CRLF3Q8IUI8 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CRLF3Q8IUI8 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CRLF3Q8IUI8 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
CRLF3Q8IUI8 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
CRLF3Q8IUI8 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
CRLF3Q8IUI8 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
CRLF3Q8IUI8 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC15.47■□□□□ 0.07
CRLF3Q8IUI8 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
CRLF3Q8IUI8 CBR1-202ENST00000399191 838 ntTSL 3 BASIC15.47■□□□□ 0.07
CRLF3Q8IUI8 AL627223.1-201ENST00000416693 442 ntBASIC15.47■□□□□ 0.07
CRLF3Q8IUI8 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC15.47■□□□□ 0.07
CRLF3Q8IUI8 AC005237.2-201ENST00000434368 219 ntBASIC15.47■□□□□ 0.07
CRLF3Q8IUI8 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC15.47■□□□□ 0.07
CRLF3Q8IUI8 PHKG1P2-201ENST00000457537 863 ntBASIC15.47■□□□□ 0.07
CRLF3Q8IUI8 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC15.47■□□□□ 0.07
CRLF3Q8IUI8 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC15.47■□□□□ 0.07
CRLF3Q8IUI8 RFPL4AP1-201ENST00000530883 850 ntBASIC15.47■□□□□ 0.07
CRLF3Q8IUI8 RNF34-208ENST00000555076 593 ntTSL 3 BASIC15.47■□□□□ 0.07
CRLF3Q8IUI8 AC004449.1-201ENST00000564240 433 ntBASIC15.47■□□□□ 0.07
CRLF3Q8IUI8 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC15.47■□□□□ 0.07
CRLF3Q8IUI8 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CRLF3Q8IUI8 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
CRLF3Q8IUI8 AC117489.1-201ENST00000625169 3217 ntBASIC15.47■□□□□ 0.07
CRLF3Q8IUI8 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC15.47■□□□□ 0.07
CRLF3Q8IUI8 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
CRLF3Q8IUI8 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CRLF3Q8IUI8 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CRLF3Q8IUI8 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CRLF3Q8IUI8 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
CRLF3Q8IUI8 AC138969.2-201ENST00000532739 9932 ntBASIC15.47■□□□□ 0.07
CRLF3Q8IUI8 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CRLF3Q8IUI8 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CRLF3Q8IUI8 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CRLF3Q8IUI8 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC15.47■□□□□ 0.07
CRLF3Q8IUI8 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CRLF3Q8IUI8 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CRLF3Q8IUI8 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
CRLF3Q8IUI8 POLL-206ENST00000370172 2308 ntTSL 2 BASIC15.46■□□□□ 0.07
CRLF3Q8IUI8 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CRLF3Q8IUI8 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC15.46■□□□□ 0.07
CRLF3Q8IUI8 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
CRLF3Q8IUI8 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
CRLF3Q8IUI8 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC15.46■□□□□ 0.07
CRLF3Q8IUI8 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
CRLF3Q8IUI8 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CRLF3Q8IUI8 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CRLF3Q8IUI8 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC15.46■□□□□ 0.07
CRLF3Q8IUI8 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC15.46■□□□□ 0.07
CRLF3Q8IUI8 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC15.46■□□□□ 0.07
CRLF3Q8IUI8 SRC-202ENST00000373558 4304 ntTSL 5 BASIC15.46■□□□□ 0.07
CRLF3Q8IUI8 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
CRLF3Q8IUI8 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
CRLF3Q8IUI8 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC15.46■□□□□ 0.07
CRLF3Q8IUI8 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CRLF3Q8IUI8 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
CRLF3Q8IUI8 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CRLF3Q8IUI8 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CRLF3Q8IUI8 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC15.46■□□□□ 0.07
CRLF3Q8IUI8 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CRLF3Q8IUI8 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CRLF3Q8IUI8 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC15.46■□□□□ 0.07
CRLF3Q8IUI8 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC15.46■□□□□ 0.07
CRLF3Q8IUI8 CCDC74BP1-201ENST00000508880 1123 ntBASIC15.46■□□□□ 0.07
CRLF3Q8IUI8 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC15.46■□□□□ 0.07
CRLF3Q8IUI8 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC15.46■□□□□ 0.07
CRLF3Q8IUI8 DAD1-205ENST00000543337 501 ntTSL 3 BASIC15.46■□□□□ 0.07
CRLF3Q8IUI8 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC15.46■□□□□ 0.07
CRLF3Q8IUI8 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CRLF3Q8IUI8 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC15.46■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms