Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
NHLRC1Q6VVB1 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC13.89□□□□□ -0.19
NHLRC1Q6VVB1 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC13.89□□□□□ -0.19
NHLRC1Q6VVB1 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
NHLRC1Q6VVB1 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
NHLRC1Q6VVB1 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
NHLRC1Q6VVB1 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
NHLRC1Q6VVB1 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
NHLRC1Q6VVB1 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC13.88□□□□□ -0.19
NHLRC1Q6VVB1 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
NHLRC1Q6VVB1 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
NHLRC1Q6VVB1 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC13.88□□□□□ -0.19
NHLRC1Q6VVB1 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
NHLRC1Q6VVB1 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
NHLRC1Q6VVB1 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
NHLRC1Q6VVB1 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
NHLRC1Q6VVB1 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
NHLRC1Q6VVB1 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC13.88□□□□□ -0.19
NHLRC1Q6VVB1 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
NHLRC1Q6VVB1 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
NHLRC1Q6VVB1 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
NHLRC1Q6VVB1 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
NHLRC1Q6VVB1 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC13.88□□□□□ -0.19
NHLRC1Q6VVB1 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC13.88□□□□□ -0.19
NHLRC1Q6VVB1 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC13.88□□□□□ -0.19
NHLRC1Q6VVB1 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC13.88□□□□□ -0.19
NHLRC1Q6VVB1 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC13.88□□□□□ -0.19
NHLRC1Q6VVB1 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC13.88□□□□□ -0.19
NHLRC1Q6VVB1 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
NHLRC1Q6VVB1 KRT18P43-201ENST00000469825 1281 ntBASIC13.88□□□□□ -0.19
NHLRC1Q6VVB1 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC13.88□□□□□ -0.19
NHLRC1Q6VVB1 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC13.88□□□□□ -0.19
NHLRC1Q6VVB1 AL645728.2-202ENST00000641679 227 ntBASIC13.88□□□□□ -0.19
NHLRC1Q6VVB1 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC13.88□□□□□ -0.19
NHLRC1Q6VVB1 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
NHLRC1Q6VVB1 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
NHLRC1Q6VVB1 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
NHLRC1Q6VVB1 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
NHLRC1Q6VVB1 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
NHLRC1Q6VVB1 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
NHLRC1Q6VVB1 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
NHLRC1Q6VVB1 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
NHLRC1Q6VVB1 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
NHLRC1Q6VVB1 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
NHLRC1Q6VVB1 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
NHLRC1Q6VVB1 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC13.88□□□□□ -0.19
NHLRC1Q6VVB1 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC13.88□□□□□ -0.19
NHLRC1Q6VVB1 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
NHLRC1Q6VVB1 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
NHLRC1Q6VVB1 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC13.88□□□□□ -0.19
NHLRC1Q6VVB1 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC13.88□□□□□ -0.19
NHLRC1Q6VVB1 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
NHLRC1Q6VVB1 LINC00528-201ENST00000600723 2160 ntBASIC13.88□□□□□ -0.19
NHLRC1Q6VVB1 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
NHLRC1Q6VVB1 CELP-203ENST00000624767 2414 ntTSL 5 BASIC13.88□□□□□ -0.19
NHLRC1Q6VVB1 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
NHLRC1Q6VVB1 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
NHLRC1Q6VVB1 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
NHLRC1Q6VVB1 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
NHLRC1Q6VVB1 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
NHLRC1Q6VVB1 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
NHLRC1Q6VVB1 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC13.87□□□□□ -0.19
NHLRC1Q6VVB1 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
NHLRC1Q6VVB1 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
NHLRC1Q6VVB1 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
NHLRC1Q6VVB1 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
NHLRC1Q6VVB1 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
NHLRC1Q6VVB1 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
NHLRC1Q6VVB1 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
NHLRC1Q6VVB1 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
NHLRC1Q6VVB1 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
NHLRC1Q6VVB1 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC13.87□□□□□ -0.19
NHLRC1Q6VVB1 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
NHLRC1Q6VVB1 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
NHLRC1Q6VVB1 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC13.87□□□□□ -0.19
NHLRC1Q6VVB1 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC13.87□□□□□ -0.19
NHLRC1Q6VVB1 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
NHLRC1Q6VVB1 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
NHLRC1Q6VVB1 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC13.87□□□□□ -0.19
NHLRC1Q6VVB1 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
NHLRC1Q6VVB1 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
NHLRC1Q6VVB1 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
NHLRC1Q6VVB1 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
NHLRC1Q6VVB1 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
NHLRC1Q6VVB1 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
NHLRC1Q6VVB1 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
NHLRC1Q6VVB1 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
NHLRC1Q6VVB1 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
NHLRC1Q6VVB1 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC13.87□□□□□ -0.19
NHLRC1Q6VVB1 GAPDHP40-201ENST00000505218 1006 ntBASIC13.87□□□□□ -0.19
NHLRC1Q6VVB1 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
NHLRC1Q6VVB1 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC13.87□□□□□ -0.19
NHLRC1Q6VVB1 REEP4-207ENST00000523293 913 ntTSL 3 BASIC13.87□□□□□ -0.19
NHLRC1Q6VVB1 AC135586.1-201ENST00000539323 574 ntBASIC13.87□□□□□ -0.19
NHLRC1Q6VVB1 AC027796.2-201ENST00000575326 344 ntBASIC13.87□□□□□ -0.19
NHLRC1Q6VVB1 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
NHLRC1Q6VVB1 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC13.87□□□□□ -0.19
NHLRC1Q6VVB1 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
NHLRC1Q6VVB1 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
NHLRC1Q6VVB1 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms