Protein–RNA interactions for Protein: Q5VTR2

RNF20, E3 ubiquitin-protein ligase BRE1A, humanhuman

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF20Q5VTR2 LINC01101-201ENST00000622953 1884 ntBASIC18.41■□□□□ 0.54
RNF20Q5VTR2 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
RNF20Q5VTR2 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RNF20Q5VTR2 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RNF20Q5VTR2 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
RNF20Q5VTR2 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
RNF20Q5VTR2 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
RNF20Q5VTR2 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
RNF20Q5VTR2 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
RNF20Q5VTR2 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
RNF20Q5VTR2 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
RNF20Q5VTR2 CLK3P2-201ENST00000427566 1453 ntBASIC18.4■□□□□ 0.54
RNF20Q5VTR2 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
RNF20Q5VTR2 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
RNF20Q5VTR2 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
RNF20Q5VTR2 AP000845.1-201ENST00000581677 2131 ntBASIC18.4■□□□□ 0.54
RNF20Q5VTR2 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
RNF20Q5VTR2 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RNF20Q5VTR2 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RNF20Q5VTR2 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC18.4■□□□□ 0.54
RNF20Q5VTR2 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
RNF20Q5VTR2 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RNF20Q5VTR2 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
RNF20Q5VTR2 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RNF20Q5VTR2 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC18.4■□□□□ 0.54
RNF20Q5VTR2 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
RNF20Q5VTR2 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
RNF20Q5VTR2 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RNF20Q5VTR2 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RNF20Q5VTR2 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RNF20Q5VTR2 HNRNPA1P40-201ENST00000426371 1278 ntBASIC18.4■□□□□ 0.54
RNF20Q5VTR2 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC18.4■□□□□ 0.54
RNF20Q5VTR2 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC18.4■□□□□ 0.54
RNF20Q5VTR2 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC18.4■□□□□ 0.54
RNF20Q5VTR2 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC18.4■□□□□ 0.54
RNF20Q5VTR2 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC18.4■□□□□ 0.54
RNF20Q5VTR2 TPRX2P-201ENST00000535362 881 ntBASIC18.4■□□□□ 0.54
RNF20Q5VTR2 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC18.4■□□□□ 0.54
RNF20Q5VTR2 REXO1L4P-201ENST00000605109 1937 ntBASIC18.4■□□□□ 0.54
RNF20Q5VTR2 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC18.4■□□□□ 0.54
RNF20Q5VTR2 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RNF20Q5VTR2 PCDHGB8P-201ENST00000502926 1973 ntBASIC18.4■□□□□ 0.54
RNF20Q5VTR2 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
RNF20Q5VTR2 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RNF20Q5VTR2 C1R-202ENST00000536053 2347 ntTSL 2 BASIC18.4■□□□□ 0.54
RNF20Q5VTR2 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
RNF20Q5VTR2 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC18.4■□□□□ 0.54
RNF20Q5VTR2 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
RNF20Q5VTR2 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC18.4■□□□□ 0.54
RNF20Q5VTR2 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RNF20Q5VTR2 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
RNF20Q5VTR2 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
RNF20Q5VTR2 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC18.4■□□□□ 0.54
RNF20Q5VTR2 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC18.4■□□□□ 0.54
RNF20Q5VTR2 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RNF20Q5VTR2 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
RNF20Q5VTR2 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.54
RNF20Q5VTR2 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.54
RNF20Q5VTR2 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
RNF20Q5VTR2 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RNF20Q5VTR2 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC18.39■□□□□ 0.53
RNF20Q5VTR2 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RNF20Q5VTR2 TPO-203ENST00000346956 2923 ntTSL 5 BASIC18.39■□□□□ 0.53
RNF20Q5VTR2 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RNF20Q5VTR2 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RNF20Q5VTR2 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC18.39■□□□□ 0.53
RNF20Q5VTR2 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
RNF20Q5VTR2 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC18.39■□□□□ 0.53
RNF20Q5VTR2 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RNF20Q5VTR2 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC18.39■□□□□ 0.53
RNF20Q5VTR2 SAMD11P1-201ENST00000571429 661 ntBASIC18.39■□□□□ 0.53
RNF20Q5VTR2 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC18.39■□□□□ 0.53
RNF20Q5VTR2 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
RNF20Q5VTR2 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RNF20Q5VTR2 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC18.39■□□□□ 0.53
RNF20Q5VTR2 LINC00528-201ENST00000600723 2160 ntBASIC18.39■□□□□ 0.53
RNF20Q5VTR2 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
RNF20Q5VTR2 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RNF20Q5VTR2 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
RNF20Q5VTR2 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RNF20Q5VTR2 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
RNF20Q5VTR2 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC18.39■□□□□ 0.53
RNF20Q5VTR2 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC18.39■□□□□ 0.53
RNF20Q5VTR2 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RNF20Q5VTR2 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RNF20Q5VTR2 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC18.39■□□□□ 0.53
RNF20Q5VTR2 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC18.39■□□□□ 0.53
RNF20Q5VTR2 REXO1L2P-201ENST00000425429 2069 ntBASIC18.38■□□□□ 0.53
RNF20Q5VTR2 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC18.38■□□□□ 0.53
RNF20Q5VTR2 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RNF20Q5VTR2 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RNF20Q5VTR2 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
RNF20Q5VTR2 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC18.38■□□□□ 0.53
RNF20Q5VTR2 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RNF20Q5VTR2 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RNF20Q5VTR2 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC18.38■□□□□ 0.53
RNF20Q5VTR2 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC18.38■□□□□ 0.53
RNF20Q5VTR2 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RNF20Q5VTR2 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RNF20Q5VTR2 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms