Protein–RNA interactions for Protein: Q5T6M2

LINC00242, Putative uncharacterized protein encoded by LINC00242, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00242Q5T6M2 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
LINC00242Q5T6M2 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC10.57□□□□□ -0.72
LINC00242Q5T6M2 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC10.57□□□□□ -0.72
LINC00242Q5T6M2 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC10.57□□□□□ -0.72
LINC00242Q5T6M2 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
LINC00242Q5T6M2 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC10.57□□□□□ -0.72
LINC00242Q5T6M2 MRPL3P1-201ENST00000400109 1033 ntBASIC10.57□□□□□ -0.72
LINC00242Q5T6M2 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC10.57□□□□□ -0.72
LINC00242Q5T6M2 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC10.57□□□□□ -0.72
LINC00242Q5T6M2 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC10.57□□□□□ -0.72
LINC00242Q5T6M2 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC10.57□□□□□ -0.72
LINC00242Q5T6M2 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
LINC00242Q5T6M2 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
LINC00242Q5T6M2 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC10.57□□□□□ -0.72
LINC00242Q5T6M2 AC145285.3-201ENST00000564603 959 ntBASIC10.57□□□□□ -0.72
LINC00242Q5T6M2 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC10.57□□□□□ -0.72
LINC00242Q5T6M2 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
LINC00242Q5T6M2 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
LINC00242Q5T6M2 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC10.57□□□□□ -0.72
LINC00242Q5T6M2 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
LINC00242Q5T6M2 SERF2-217ENST00000630046 862 ntTSL 5 BASIC10.57□□□□□ -0.72
LINC00242Q5T6M2 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
LINC00242Q5T6M2 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC10.57□□□□□ -0.72
LINC00242Q5T6M2 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
LINC00242Q5T6M2 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC10.57□□□□□ -0.72
LINC00242Q5T6M2 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
LINC00242Q5T6M2 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
LINC00242Q5T6M2 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC10.57□□□□□ -0.72
LINC00242Q5T6M2 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC10.57□□□□□ -0.72
LINC00242Q5T6M2 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
LINC00242Q5T6M2 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
LINC00242Q5T6M2 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
LINC00242Q5T6M2 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
LINC00242Q5T6M2 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
LINC00242Q5T6M2 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
LINC00242Q5T6M2 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC10.57□□□□□ -0.72
LINC00242Q5T6M2 SRC-202ENST00000373558 4304 ntTSL 5 BASIC10.57□□□□□ -0.72
LINC00242Q5T6M2 PPP1R26P4-201ENST00000619065 3527 ntBASIC10.57□□□□□ -0.72
LINC00242Q5T6M2 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
LINC00242Q5T6M2 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
LINC00242Q5T6M2 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
LINC00242Q5T6M2 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
LINC00242Q5T6M2 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC10.56□□□□□ -0.72
LINC00242Q5T6M2 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
LINC00242Q5T6M2 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
LINC00242Q5T6M2 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
LINC00242Q5T6M2 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC10.56□□□□□ -0.72
LINC00242Q5T6M2 AC012508.2-201ENST00000567613 1472 ntBASIC10.56□□□□□ -0.72
LINC00242Q5T6M2 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC10.56□□□□□ -0.72
LINC00242Q5T6M2 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
LINC00242Q5T6M2 AP001267.2-201ENST00000532619 2086 ntBASIC10.56□□□□□ -0.72
LINC00242Q5T6M2 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC10.56□□□□□ -0.72
LINC00242Q5T6M2 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC10.56□□□□□ -0.72
LINC00242Q5T6M2 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
LINC00242Q5T6M2 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
LINC00242Q5T6M2 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC10.56□□□□□ -0.72
LINC00242Q5T6M2 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
LINC00242Q5T6M2 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC10.56□□□□□ -0.72
LINC00242Q5T6M2 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
LINC00242Q5T6M2 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC10.56□□□□□ -0.72
LINC00242Q5T6M2 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC10.56□□□□□ -0.72
LINC00242Q5T6M2 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
LINC00242Q5T6M2 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
LINC00242Q5T6M2 PTMS-202ENST00000389462 773 ntTSL 2 BASIC10.56□□□□□ -0.72
LINC00242Q5T6M2 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC10.56□□□□□ -0.72
LINC00242Q5T6M2 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC10.56□□□□□ -0.72
LINC00242Q5T6M2 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC10.56□□□□□ -0.72
LINC00242Q5T6M2 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
LINC00242Q5T6M2 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC10.56□□□□□ -0.72
LINC00242Q5T6M2 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
LINC00242Q5T6M2 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC10.56□□□□□ -0.72
LINC00242Q5T6M2 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
LINC00242Q5T6M2 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.72
LINC00242Q5T6M2 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC10.56□□□□□ -0.72
LINC00242Q5T6M2 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC10.56□□□□□ -0.72
LINC00242Q5T6M2 IGHV3OR16-6-201ENST00000568775 360 ntBASIC10.56□□□□□ -0.72
LINC00242Q5T6M2 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC10.56□□□□□ -0.72
LINC00242Q5T6M2 SSH2-211ENST00000590153 570 ntTSL 4 BASIC10.56□□□□□ -0.72
LINC00242Q5T6M2 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC10.56□□□□□ -0.72
LINC00242Q5T6M2 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC10.56□□□□□ -0.72
LINC00242Q5T6M2 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
LINC00242Q5T6M2 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC10.56□□□□□ -0.72
LINC00242Q5T6M2 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
LINC00242Q5T6M2 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC10.56□□□□□ -0.72
LINC00242Q5T6M2 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC10.56□□□□□ -0.72
LINC00242Q5T6M2 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
LINC00242Q5T6M2 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC10.56□□□□□ -0.72
LINC00242Q5T6M2 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC10.56□□□□□ -0.72
LINC00242Q5T6M2 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
LINC00242Q5T6M2 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
LINC00242Q5T6M2 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC10.56□□□□□ -0.72
LINC00242Q5T6M2 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC10.56□□□□□ -0.72
LINC00242Q5T6M2 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC10.56□□□□□ -0.72
LINC00242Q5T6M2 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC10.56□□□□□ -0.72
LINC00242Q5T6M2 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC10.56□□□□□ -0.72
LINC00242Q5T6M2 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
LINC00242Q5T6M2 SF1-209ENST00000433274 2317 ntTSL 2 BASIC10.56□□□□□ -0.72
LINC00242Q5T6M2 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC10.56□□□□□ -0.72
LINC00242Q5T6M2 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC10.56□□□□□ -0.72
LINC00242Q5T6M2 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC10.56□□□□□ -0.72
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms