Protein–RNA interactions for Protein: Q3KP44

ANKRD55, Ankyrin repeat domain-containing protein 55, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ANKRD55Q3KP44 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
ANKRD55Q3KP44 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC12.86□□□□□ -0.35
ANKRD55Q3KP44 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
ANKRD55Q3KP44 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
ANKRD55Q3KP44 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
ANKRD55Q3KP44 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC12.85□□□□□ -0.35
ANKRD55Q3KP44 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC12.85□□□□□ -0.35
ANKRD55Q3KP44 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC12.85□□□□□ -0.35
ANKRD55Q3KP44 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC12.85□□□□□ -0.35
ANKRD55Q3KP44 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
ANKRD55Q3KP44 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC12.85□□□□□ -0.35
ANKRD55Q3KP44 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
ANKRD55Q3KP44 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC12.85□□□□□ -0.35
ANKRD55Q3KP44 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
ANKRD55Q3KP44 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
ANKRD55Q3KP44 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
ANKRD55Q3KP44 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
ANKRD55Q3KP44 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
ANKRD55Q3KP44 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
ANKRD55Q3KP44 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
ANKRD55Q3KP44 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
ANKRD55Q3KP44 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
ANKRD55Q3KP44 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC12.85□□□□□ -0.35
ANKRD55Q3KP44 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC12.85□□□□□ -0.35
ANKRD55Q3KP44 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
ANKRD55Q3KP44 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC12.85□□□□□ -0.35
ANKRD55Q3KP44 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
ANKRD55Q3KP44 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC12.85□□□□□ -0.35
ANKRD55Q3KP44 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC12.85□□□□□ -0.35
ANKRD55Q3KP44 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC12.85□□□□□ -0.35
ANKRD55Q3KP44 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC12.85□□□□□ -0.35
ANKRD55Q3KP44 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
ANKRD55Q3KP44 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
ANKRD55Q3KP44 VN2R19P-201ENST00000442399 1052 ntBASIC12.85□□□□□ -0.35
ANKRD55Q3KP44 EEF1DP4-201ENST00000446006 880 ntBASIC12.85□□□□□ -0.35
ANKRD55Q3KP44 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
ANKRD55Q3KP44 RNA5SP416-201ENST00000516838 111 ntBASIC12.85□□□□□ -0.35
ANKRD55Q3KP44 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC12.85□□□□□ -0.35
ANKRD55Q3KP44 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
ANKRD55Q3KP44 SPTSSB-204ENST00000617024 1292 ntBASIC12.85□□□□□ -0.35
ANKRD55Q3KP44 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC12.85□□□□□ -0.35
ANKRD55Q3KP44 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
ANKRD55Q3KP44 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC12.85□□□□□ -0.35
ANKRD55Q3KP44 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
ANKRD55Q3KP44 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
ANKRD55Q3KP44 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
ANKRD55Q3KP44 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
ANKRD55Q3KP44 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
ANKRD55Q3KP44 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC12.85□□□□□ -0.35
ANKRD55Q3KP44 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
ANKRD55Q3KP44 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
ANKRD55Q3KP44 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC12.85□□□□□ -0.35
ANKRD55Q3KP44 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
ANKRD55Q3KP44 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
ANKRD55Q3KP44 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC12.85□□□□□ -0.35
ANKRD55Q3KP44 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC12.85□□□□□ -0.35
ANKRD55Q3KP44 AL607033.1-201ENST00000623900 1599 ntBASIC12.85□□□□□ -0.35
ANKRD55Q3KP44 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC12.85□□□□□ -0.35
ANKRD55Q3KP44 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
ANKRD55Q3KP44 CICP17-201ENST00000418553 2377 ntBASIC12.85□□□□□ -0.35
ANKRD55Q3KP44 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
ANKRD55Q3KP44 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC12.85□□□□□ -0.35
ANKRD55Q3KP44 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC12.85□□□□□ -0.35
ANKRD55Q3KP44 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
ANKRD55Q3KP44 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
ANKRD55Q3KP44 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC12.85□□□□□ -0.35
ANKRD55Q3KP44 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
ANKRD55Q3KP44 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
ANKRD55Q3KP44 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
ANKRD55Q3KP44 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
ANKRD55Q3KP44 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
ANKRD55Q3KP44 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC12.84□□□□□ -0.35
ANKRD55Q3KP44 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
ANKRD55Q3KP44 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
ANKRD55Q3KP44 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
ANKRD55Q3KP44 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
ANKRD55Q3KP44 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
ANKRD55Q3KP44 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC12.84□□□□□ -0.35
ANKRD55Q3KP44 FOXO1B-201ENST00000504678 1527 ntBASIC12.84□□□□□ -0.35
ANKRD55Q3KP44 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC12.84□□□□□ -0.35
ANKRD55Q3KP44 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC12.84□□□□□ -0.35
ANKRD55Q3KP44 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
ANKRD55Q3KP44 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC12.84□□□□□ -0.35
ANKRD55Q3KP44 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
ANKRD55Q3KP44 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC12.84□□□□□ -0.35
ANKRD55Q3KP44 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC12.84□□□□□ -0.35
ANKRD55Q3KP44 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
ANKRD55Q3KP44 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
ANKRD55Q3KP44 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC12.84□□□□□ -0.35
ANKRD55Q3KP44 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
ANKRD55Q3KP44 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC12.84□□□□□ -0.35
ANKRD55Q3KP44 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC12.84□□□□□ -0.35
ANKRD55Q3KP44 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC12.84□□□□□ -0.35
ANKRD55Q3KP44 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC12.84□□□□□ -0.35
ANKRD55Q3KP44 AL138918.1-201ENST00000568306 659 ntBASIC12.84□□□□□ -0.35
ANKRD55Q3KP44 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC12.84□□□□□ -0.35
ANKRD55Q3KP44 PIN1-206ENST00000587625 878 ntTSL 2 BASIC12.84□□□□□ -0.35
ANKRD55Q3KP44 AC073389.1-201ENST00000595595 795 ntBASIC12.84□□□□□ -0.35
ANKRD55Q3KP44 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC12.84□□□□□ -0.35
ANKRD55Q3KP44 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC12.84□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms