Protein–RNA interactions for Protein: Q04837

SSBP1, Single-stranded DNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 148 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1Q04837 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
SSBP1Q04837 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
SSBP1Q04837 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
SSBP1Q04837 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
SSBP1Q04837 AC015818.8-201ENST00000587907 1519 ntBASIC13.05□□□□□ -0.32
SSBP1Q04837 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
SSBP1Q04837 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
SSBP1Q04837 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
SSBP1Q04837 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
SSBP1Q04837 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC13.05□□□□□ -0.32
SSBP1Q04837 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC13.05□□□□□ -0.32
SSBP1Q04837 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
SSBP1Q04837 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC13.05□□□□□ -0.32
SSBP1Q04837 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
SSBP1Q04837 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
SSBP1Q04837 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC13.05□□□□□ -0.32
SSBP1Q04837 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
SSBP1Q04837 AZGP1P1-201ENST00000411909 902 ntBASIC13.05□□□□□ -0.32
SSBP1Q04837 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC13.05□□□□□ -0.32
SSBP1Q04837 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC13.05□□□□□ -0.32
SSBP1Q04837 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC13.05□□□□□ -0.32
SSBP1Q04837 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC13.05□□□□□ -0.32
SSBP1Q04837 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC13.05□□□□□ -0.32
SSBP1Q04837 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC13.05□□□□□ -0.32
SSBP1Q04837 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
SSBP1Q04837 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC13.05□□□□□ -0.32
SSBP1Q04837 NKG7-205ENST00000600427 520 ntTSL 3 BASIC13.05□□□□□ -0.32
SSBP1Q04837 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
SSBP1Q04837 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC13.05□□□□□ -0.32
SSBP1Q04837 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
SSBP1Q04837 AC008267.7-201ENST00000624570 1194 ntBASIC13.05□□□□□ -0.32
SSBP1Q04837 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
SSBP1Q04837 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC13.05□□□□□ -0.32
SSBP1Q04837 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
SSBP1Q04837 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC13.05□□□□□ -0.32
SSBP1Q04837 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
SSBP1Q04837 IGHG3-202ENST00000641136 2751 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
SSBP1Q04837 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
SSBP1Q04837 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
SSBP1Q04837 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
SSBP1Q04837 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
SSBP1Q04837 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
SSBP1Q04837 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
SSBP1Q04837 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
SSBP1Q04837 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC13.05□□□□□ -0.32
SSBP1Q04837 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC13.05□□□□□ -0.32
SSBP1Q04837 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
SSBP1Q04837 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
SSBP1Q04837 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
SSBP1Q04837 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC13.04□□□□□ -0.32
SSBP1Q04837 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC13.04□□□□□ -0.32
SSBP1Q04837 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC13.04□□□□□ -0.32
SSBP1Q04837 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
SSBP1Q04837 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC13.04□□□□□ -0.32
SSBP1Q04837 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
SSBP1Q04837 CYP20A1-201ENST00000356079 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
SSBP1Q04837 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
SSBP1Q04837 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
SSBP1Q04837 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC13.04□□□□□ -0.32
SSBP1Q04837 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC13.04□□□□□ -0.32
SSBP1Q04837 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
SSBP1Q04837 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
SSBP1Q04837 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
SSBP1Q04837 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
SSBP1Q04837 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC13.04□□□□□ -0.32
SSBP1Q04837 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
SSBP1Q04837 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC13.04□□□□□ -0.32
SSBP1Q04837 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC13.04□□□□□ -0.32
SSBP1Q04837 HLA-H-201ENST00000383620 1096 ntBASIC13.04□□□□□ -0.32
SSBP1Q04837 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
SSBP1Q04837 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC13.04□□□□□ -0.32
SSBP1Q04837 AC142381.1-201ENST00000426099 345 ntBASIC13.04□□□□□ -0.32
SSBP1Q04837 HNRNPDP1-201ENST00000439535 754 ntBASIC13.04□□□□□ -0.32
SSBP1Q04837 AF186996.4-201ENST00000467186 377 ntBASIC13.04□□□□□ -0.32
SSBP1Q04837 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC13.04□□□□□ -0.32
SSBP1Q04837 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC13.04□□□□□ -0.32
SSBP1Q04837 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC13.04□□□□□ -0.32
SSBP1Q04837 RARRES2P8-201ENST00000566335 367 ntBASIC13.04□□□□□ -0.32
SSBP1Q04837 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC13.04□□□□□ -0.32
SSBP1Q04837 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC13.04□□□□□ -0.32
SSBP1Q04837 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC13.04□□□□□ -0.32
SSBP1Q04837 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC13.04□□□□□ -0.32
SSBP1Q04837 AQP6-205ENST00000618286 829 ntTSL 5 BASIC13.04□□□□□ -0.32
SSBP1Q04837 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC13.04□□□□□ -0.32
SSBP1Q04837 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC13.04□□□□□ -0.32
SSBP1Q04837 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC13.04□□□□□ -0.32
SSBP1Q04837 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
SSBP1Q04837 AKAP8P1-201ENST00000434743 1349 ntBASIC13.04□□□□□ -0.32
SSBP1Q04837 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
SSBP1Q04837 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
SSBP1Q04837 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
SSBP1Q04837 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC13.04□□□□□ -0.32
SSBP1Q04837 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
SSBP1Q04837 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
SSBP1Q04837 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
SSBP1Q04837 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
SSBP1Q04837 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
SSBP1Q04837 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
SSBP1Q04837 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
SSBP1Q04837 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms