Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC15.01□□□□□ -0.01
YBX1P67809 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
YBX1P67809 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC15.01□□□□□ -0.01
YBX1P67809 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
YBX1P67809 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC15.01□□□□□ -0.01
YBX1P67809 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
YBX1P67809 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC15.01□□□□□ -0.01
YBX1P67809 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
YBX1P67809 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
YBX1P67809 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
YBX1P67809 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
YBX1P67809 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC15.01□□□□□ -0.01
YBX1P67809 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
YBX1P67809 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
YBX1P67809 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
YBX1P67809 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC15.01□□□□□ -0.01
YBX1P67809 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
YBX1P67809 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC15.01□□□□□ -0.01
YBX1P67809 FAM86LP-201ENST00000478302 853 ntBASIC15.01□□□□□ -0.01
YBX1P67809 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
YBX1P67809 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC15.01□□□□□ -0.01
YBX1P67809 AC055876.2-201ENST00000531834 546 ntBASIC15.01□□□□□ -0.01
YBX1P67809 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC15.01□□□□□ -0.01
YBX1P67809 AC123567.1-201ENST00000548294 1261 ntBASIC15.01□□□□□ -0.01
YBX1P67809 SPDYE22P-201ENST00000582158 798 ntBASIC15.01□□□□□ -0.01
YBX1P67809 CTBP2P3-201ENST00000585629 1255 ntBASIC15.01□□□□□ -0.01
YBX1P67809 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC15.01□□□□□ -0.01
YBX1P67809 AC239800.4-201ENST00000603712 296 ntBASIC15.01□□□□□ -0.01
YBX1P67809 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC15.01□□□□□ -0.01
YBX1P67809 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
YBX1P67809 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC15.01□□□□□ -0.01
YBX1P67809 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC15.01□□□□□ -0.01
YBX1P67809 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC15.01□□□□□ -0.01
YBX1P67809 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
YBX1P67809 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
YBX1P67809 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC15.01□□□□□ -0.01
YBX1P67809 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC15.01□□□□□ -0.01
YBX1P67809 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC15.01□□□□□ -0.01
YBX1P67809 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC15.01□□□□□ -0.01
YBX1P67809 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
YBX1P67809 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
YBX1P67809 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
YBX1P67809 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
YBX1P67809 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
YBX1P67809 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC15.01□□□□□ -0.01
YBX1P67809 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC15.01□□□□□ -0.01
YBX1P67809 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
YBX1P67809 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
YBX1P67809 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC15□□□□□ -0.01
YBX1P67809 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC15□□□□□ -0.01
YBX1P67809 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
YBX1P67809 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC15□□□□□ -0.01
YBX1P67809 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
YBX1P67809 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
YBX1P67809 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
YBX1P67809 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC15□□□□□ -0.01
YBX1P67809 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC15□□□□□ -0.01
YBX1P67809 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC15□□□□□ -0.01
YBX1P67809 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC15□□□□□ -0.01
YBX1P67809 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC15□□□□□ -0.01
YBX1P67809 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC15□□□□□ -0.01
YBX1P67809 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
YBX1P67809 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC15□□□□□ -0.01
YBX1P67809 AL133267.1-201ENST00000398220 340 ntBASIC15□□□□□ -0.01
YBX1P67809 DGCR5-201ENST00000399539 862 ntBASIC15□□□□□ -0.01
YBX1P67809 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC15□□□□□ -0.01
YBX1P67809 AL035633.1-201ENST00000406139 838 ntBASIC15□□□□□ -0.01
YBX1P67809 AL353779.1-201ENST00000434793 351 ntBASIC15□□□□□ -0.01
YBX1P67809 GALT-202ENST00000450095 1280 ntTSL 2 BASIC15□□□□□ -0.01
YBX1P67809 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC15□□□□□ -0.01
YBX1P67809 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC15□□□□□ -0.01
YBX1P67809 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC15□□□□□ -0.01
YBX1P67809 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC15□□□□□ -0.01
YBX1P67809 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC15□□□□□ -0.01
YBX1P67809 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
YBX1P67809 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC15□□□□□ -0.01
YBX1P67809 AC000095.1-201ENST00000603208 874 ntBASIC15□□□□□ -0.01
YBX1P67809 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
YBX1P67809 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC15□□□□□ -0.01
YBX1P67809 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
YBX1P67809 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
YBX1P67809 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
YBX1P67809 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
YBX1P67809 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC15□□□□□ -0.01
YBX1P67809 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC15□□□□□ -0.01
YBX1P67809 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
YBX1P67809 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
YBX1P67809 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
YBX1P67809 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC15□□□□□ -0.01
YBX1P67809 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC15□□□□□ -0.01
YBX1P67809 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
YBX1P67809 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
YBX1P67809 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
YBX1P67809 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC14.99□□□□□ -0.01
YBX1P67809 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC14.99□□□□□ -0.01
YBX1P67809 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
YBX1P67809 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
YBX1P67809 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
YBX1P67809 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC14.99□□□□□ -0.01
YBX1P67809 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 57.8 ms