Protein–RNA interactions for Protein: P57055

RIPPLY3, Protein ripply3, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPPLY3P57055 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC12.86□□□□□ -0.35
RIPPLY3P57055 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
RIPPLY3P57055 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
RIPPLY3P57055 AL122018.1-201ENST00000446607 2310 ntBASIC12.86□□□□□ -0.35
RIPPLY3P57055 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC12.86□□□□□ -0.35
RIPPLY3P57055 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC12.86□□□□□ -0.35
RIPPLY3P57055 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
RIPPLY3P57055 CHCHD7-202ENST00000355315 1535 ntTSL 2 BASIC12.86□□□□□ -0.35
RIPPLY3P57055 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
RIPPLY3P57055 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC12.86□□□□□ -0.35
RIPPLY3P57055 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
RIPPLY3P57055 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC12.86□□□□□ -0.35
RIPPLY3P57055 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
RIPPLY3P57055 KCTD1-207ENST00000580059 1425 ntAPPRIS P1 TSL 3 BASIC12.86□□□□□ -0.35
RIPPLY3P57055 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
RIPPLY3P57055 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
RIPPLY3P57055 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC12.86□□□□□ -0.35
RIPPLY3P57055 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC12.86□□□□□ -0.35
RIPPLY3P57055 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
RIPPLY3P57055 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC12.86□□□□□ -0.35
RIPPLY3P57055 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC12.86□□□□□ -0.35
RIPPLY3P57055 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
RIPPLY3P57055 TEX264-201ENST00000341333 1340 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
RIPPLY3P57055 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
RIPPLY3P57055 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
RIPPLY3P57055 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC12.86□□□□□ -0.35
RIPPLY3P57055 AL138688.1-201ENST00000624851 1594 ntBASIC12.86□□□□□ -0.35
RIPPLY3P57055 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC12.86□□□□□ -0.35
RIPPLY3P57055 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
RIPPLY3P57055 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC12.85□□□□□ -0.35
RIPPLY3P57055 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC12.85□□□□□ -0.35
RIPPLY3P57055 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
RIPPLY3P57055 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
RIPPLY3P57055 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
RIPPLY3P57055 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
RIPPLY3P57055 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC12.85□□□□□ -0.35
RIPPLY3P57055 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
RIPPLY3P57055 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
RIPPLY3P57055 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
RIPPLY3P57055 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
RIPPLY3P57055 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
RIPPLY3P57055 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
RIPPLY3P57055 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
RIPPLY3P57055 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
RIPPLY3P57055 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC12.85□□□□□ -0.35
RIPPLY3P57055 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC12.85□□□□□ -0.35
RIPPLY3P57055 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
RIPPLY3P57055 CTSV-201ENST00000259470 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
RIPPLY3P57055 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
RIPPLY3P57055 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC12.85□□□□□ -0.35
RIPPLY3P57055 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
RIPPLY3P57055 ACKR1-201ENST00000368121 1240 ntBASIC12.85□□□□□ -0.35
RIPPLY3P57055 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC12.85□□□□□ -0.35
RIPPLY3P57055 BCAS2P2-201ENST00000425064 674 ntBASIC12.85□□□□□ -0.35
RIPPLY3P57055 POM121L9P-203ENST00000441984 1285 ntBASIC12.85□□□□□ -0.35
RIPPLY3P57055 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
RIPPLY3P57055 AC024293.1-201ENST00000467930 498 ntBASIC12.85□□□□□ -0.35
RIPPLY3P57055 AC108199.1-201ENST00000504249 508 ntTSL 3 BASIC12.85□□□□□ -0.35
RIPPLY3P57055 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC12.85□□□□□ -0.35
RIPPLY3P57055 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC12.85□□□□□ -0.35
RIPPLY3P57055 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
RIPPLY3P57055 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC12.85□□□□□ -0.35
RIPPLY3P57055 AF111169.2-201ENST00000553758 721 ntTSL 3 BASIC12.85□□□□□ -0.35
RIPPLY3P57055 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC12.85□□□□□ -0.35
RIPPLY3P57055 ANKRD11-208ENST00000563291 593 ntTSL 5 BASIC12.85□□□□□ -0.35
RIPPLY3P57055 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC12.85□□□□□ -0.35
RIPPLY3P57055 CADM1-221ENST00000612235 1042 ntTSL 5 BASIC12.85□□□□□ -0.35
RIPPLY3P57055 AC244250.3-201ENST00000620749 366 ntBASIC12.85□□□□□ -0.35
RIPPLY3P57055 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC12.85□□□□□ -0.35
RIPPLY3P57055 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC12.85□□□□□ -0.35
RIPPLY3P57055 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
RIPPLY3P57055 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
RIPPLY3P57055 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC12.85□□□□□ -0.35
RIPPLY3P57055 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
RIPPLY3P57055 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
RIPPLY3P57055 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
RIPPLY3P57055 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
RIPPLY3P57055 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC12.85□□□□□ -0.35
RIPPLY3P57055 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC12.85□□□□□ -0.35
RIPPLY3P57055 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
RIPPLY3P57055 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC12.85□□□□□ -0.35
RIPPLY3P57055 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC12.85□□□□□ -0.35
RIPPLY3P57055 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC12.85□□□□□ -0.35
RIPPLY3P57055 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
RIPPLY3P57055 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
RIPPLY3P57055 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC12.84□□□□□ -0.35
RIPPLY3P57055 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC12.84□□□□□ -0.35
RIPPLY3P57055 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
RIPPLY3P57055 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
RIPPLY3P57055 OXNAD1-202ENST00000435829 1643 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
RIPPLY3P57055 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
RIPPLY3P57055 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
RIPPLY3P57055 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
RIPPLY3P57055 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC12.84□□□□□ -0.35
RIPPLY3P57055 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC12.84□□□□□ -0.35
RIPPLY3P57055 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC12.84□□□□□ -0.35
RIPPLY3P57055 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
RIPPLY3P57055 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC12.84□□□□□ -0.35
RIPPLY3P57055 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC12.84□□□□□ -0.35
RIPPLY3P57055 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms