Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC14.74□□□□□ -0.05
CLDN6P56747 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC14.74□□□□□ -0.05
CLDN6P56747 AL133499.1-201ENST00000596207 608 ntBASIC14.74□□□□□ -0.05
CLDN6P56747 AC008763.1-201ENST00000601797 843 ntTSL 3 BASIC14.74□□□□□ -0.05
CLDN6P56747 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
CLDN6P56747 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CLDN6P56747 AC026691.1-201ENST00000602502 2017 ntBASIC14.74□□□□□ -0.05
CLDN6P56747 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
CLDN6P56747 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC14.74□□□□□ -0.05
CLDN6P56747 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CLDN6P56747 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CLDN6P56747 KRT8P4-201ENST00000509735 1454 ntBASIC14.74□□□□□ -0.05
CLDN6P56747 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CLDN6P56747 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
CLDN6P56747 AC022188.1-201ENST00000620960 1664 ntBASIC14.74□□□□□ -0.05
CLDN6P56747 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
CLDN6P56747 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CLDN6P56747 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CLDN6P56747 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
CLDN6P56747 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
CLDN6P56747 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
CLDN6P56747 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
CLDN6P56747 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CLDN6P56747 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CLDN6P56747 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC14.73□□□□□ -0.05
CLDN6P56747 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
CLDN6P56747 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
CLDN6P56747 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC14.73□□□□□ -0.05
CLDN6P56747 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CLDN6P56747 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
CLDN6P56747 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC14.73□□□□□ -0.05
CLDN6P56747 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CLDN6P56747 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CLDN6P56747 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
CLDN6P56747 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CLDN6P56747 ACTG1P2-201ENST00000415776 1125 ntBASIC14.73□□□□□ -0.05
CLDN6P56747 ACTG1P11-201ENST00000425411 1125 ntBASIC14.73□□□□□ -0.05
CLDN6P56747 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC14.73□□□□□ -0.05
CLDN6P56747 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CLDN6P56747 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC14.73□□□□□ -0.05
CLDN6P56747 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC14.73□□□□□ -0.05
CLDN6P56747 TBCB-211ENST00000589996 724 ntTSL 3 BASIC14.73□□□□□ -0.05
CLDN6P56747 CROCCP3-204ENST00000590118 574 ntTSL 4 BASIC14.73□□□□□ -0.05
CLDN6P56747 OR10B1P-201ENST00000601666 907 ntBASIC14.73□□□□□ -0.05
CLDN6P56747 AC025181.2-201ENST00000606994 802 ntBASIC14.73□□□□□ -0.05
CLDN6P56747 AC138649.2-201ENST00000615886 705 ntBASIC14.73□□□□□ -0.05
CLDN6P56747 AL021997.3-201ENST00000621053 557 ntAPPRIS P1 TSL 4 BASIC14.73□□□□□ -0.05
CLDN6P56747 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC14.73□□□□□ -0.05
CLDN6P56747 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
CLDN6P56747 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
CLDN6P56747 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CLDN6P56747 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC14.73□□□□□ -0.05
CLDN6P56747 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
CLDN6P56747 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC14.73□□□□□ -0.05
CLDN6P56747 AL391005.1-201ENST00000623953 2435 ntBASIC14.73□□□□□ -0.05
CLDN6P56747 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
CLDN6P56747 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
CLDN6P56747 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CLDN6P56747 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CLDN6P56747 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC14.73□□□□□ -0.05
CLDN6P56747 MFF-204ENST00000353339 2186 ntTSL 5 BASIC14.73□□□□□ -0.05
CLDN6P56747 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
CLDN6P56747 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC14.72□□□□□ -0.05
CLDN6P56747 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CLDN6P56747 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC14.72□□□□□ -0.05
CLDN6P56747 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CLDN6P56747 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CLDN6P56747 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CLDN6P56747 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC14.72□□□□□ -0.05
CLDN6P56747 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
CLDN6P56747 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CLDN6P56747 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
CLDN6P56747 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CLDN6P56747 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CLDN6P56747 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CLDN6P56747 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC14.72□□□□□ -0.05
CLDN6P56747 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CLDN6P56747 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CLDN6P56747 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CLDN6P56747 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
CLDN6P56747 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC14.72□□□□□ -0.05
CLDN6P56747 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC14.72□□□□□ -0.05
CLDN6P56747 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CLDN6P56747 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
CLDN6P56747 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC14.72□□□□□ -0.05
CLDN6P56747 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC14.72□□□□□ -0.05
CLDN6P56747 FLII-221ENST00000578558 2377 ntTSL 5 BASIC14.72□□□□□ -0.05
CLDN6P56747 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CLDN6P56747 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
CLDN6P56747 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CLDN6P56747 MIR769-201ENST00000390225 118 ntBASIC14.72□□□□□ -0.05
CLDN6P56747 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CLDN6P56747 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CLDN6P56747 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CLDN6P56747 GDAP1-202ENST00000434412 1228 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CLDN6P56747 FAM8A4P-201ENST00000435433 1213 ntBASIC14.72□□□□□ -0.05
CLDN6P56747 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC14.72□□□□□ -0.05
CLDN6P56747 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC14.72□□□□□ -0.05
CLDN6P56747 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
CLDN6P56747 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms