Protein–RNA interactions for Protein: P52952

NKX2-5, Homeobox protein Nkx-2.5, humanhuman

Predicted RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-5P52952 EPB41L1-202ENST00000338074 6266 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
NKX2-5P52952 TMOD1-201ENST00000259365 3343 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
NKX2-5P52952 CCNE2-205ENST00000520509 3330 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
NKX2-5P52952 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
NKX2-5P52952 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
NKX2-5P52952 PHLDB2-204ENST00000431670 6127 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
NKX2-5P52952 GGA3-214ENST00000582717 2255 ntTSL 2 BASIC13.1□□□□□ -0.31
NKX2-5P52952 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC13.1□□□□□ -0.31
NKX2-5P52952 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
NKX2-5P52952 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC13.1□□□□□ -0.31
NKX2-5P52952 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
NKX2-5P52952 IRF6-204ENST00000542854 4256 ntTSL 2 BASIC13.1□□□□□ -0.31
NKX2-5P52952 VASH2-203ENST00000366965 3572 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
NKX2-5P52952 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
NKX2-5P52952 PSMC1-201ENST00000261303 4448 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
NKX2-5P52952 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
NKX2-5P52952 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
NKX2-5P52952 PDXK-210ENST00000468090 7297 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
NKX2-5P52952 BNIP3L-201ENST00000380629 3610 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
NKX2-5P52952 PRPF4-201ENST00000374198 2787 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
NKX2-5P52952 PIM2-201ENST00000376509 2075 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
NKX2-5P52952 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
NKX2-5P52952 AC012531.1-201ENST00000562848 2680 ntBASIC13.09□□□□□ -0.31
NKX2-5P52952 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
NKX2-5P52952 TCAF2-205ENST00000444908 2976 ntTSL 5 BASIC13.09□□□□□ -0.31
NKX2-5P52952 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
NKX2-5P52952 ZNF792-201ENST00000404801 3888 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
NKX2-5P52952 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
NKX2-5P52952 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
NKX2-5P52952 NPTN-IT1-201ENST00000628401 2283 ntBASIC13.09□□□□□ -0.31
NKX2-5P52952 MEP1A-201ENST00000230588 2892 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
NKX2-5P52952 HARS-207ENST00000504156 3334 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
NKX2-5P52952 PRPF40B-209ENST00000548825 3307 ntAPPRIS P2 TSL 5 BASIC13.09□□□□□ -0.31
NKX2-5P52952 ARHGAP33-204ENST00000378944 4219 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
NKX2-5P52952 CRY2-212ENST00000616623 4204 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
NKX2-5P52952 TONSL-201ENST00000409379 4502 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
NKX2-5P52952 CCT2-201ENST00000299300 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
NKX2-5P52952 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC13.09□□□□□ -0.31
NKX2-5P52952 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
NKX2-5P52952 FCHSD1-209ENST00000522783 2477 ntTSL 5 BASIC13.09□□□□□ -0.31
NKX2-5P52952 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC13.09□□□□□ -0.31
NKX2-5P52952 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC13.09□□□□□ -0.31
NKX2-5P52952 KLF13-207ENST00000560473 489 ntTSL 3 BASIC13.09□□□□□ -0.31
NKX2-5P52952 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
NKX2-5P52952 RPS15-207ENST00000591032 550 ntTSL 3 BASIC13.09□□□□□ -0.31
NKX2-5P52952 RPS15-212ENST00000593052 629 ntTSL 2 BASIC13.09□□□□□ -0.31
NKX2-5P52952 AL136038.4-201ENST00000603606 1261 ntBASIC13.09□□□□□ -0.31
NKX2-5P52952 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC13.09□□□□□ -0.31
NKX2-5P52952 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
NKX2-5P52952 ADAMTS13-202ENST00000356589 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
NKX2-5P52952 CREBZF-204ENST00000527447 4037 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
NKX2-5P52952 CAPN1-202ENST00000524773 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
NKX2-5P52952 PIAS2-201ENST00000324794 4543 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
NKX2-5P52952 ZMYM3-207ENST00000373998 6067 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
NKX2-5P52952 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
NKX2-5P52952 HOXB13-201ENST00000290295 3467 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
NKX2-5P52952 OCA2-202ENST00000354638 3186 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
NKX2-5P52952 IFT81-202ENST00000361948 3048 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
NKX2-5P52952 FRMD1-205ENST00000440994 2857 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
NKX2-5P52952 CTCFL-218ENST00000608440 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
NKX2-5P52952 AC026992.2-203ENST00000563004 2419 ntBASIC13.09□□□□□ -0.31
NKX2-5P52952 RBM15-203ENST00000602849 3368 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
NKX2-5P52952 AC104129.1-202ENST00000480694 4481 ntTSL 2 BASIC13.09□□□□□ -0.31
NKX2-5P52952 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
NKX2-5P52952 KCNIP3-202ENST00000360990 2798 ntTSL 5 BASIC13.09□□□□□ -0.31
NKX2-5P52952 PDZRN3-208ENST00000479530 2778 ntTSL 2 BASIC13.09□□□□□ -0.31
NKX2-5P52952 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
NKX2-5P52952 AL033529.1-201ENST00000480336 3447 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
NKX2-5P52952 PDZD4-209ENST00000544474 3418 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
NKX2-5P52952 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC13.09□□□□□ -0.31
NKX2-5P52952 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
NKX2-5P52952 TEX35-204ENST00000367642 2452 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.31
NKX2-5P52952 ENOX1-201ENST00000261488 2982 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
NKX2-5P52952 EDEM3-202ENST00000367512 6678 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.31
NKX2-5P52952 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
NKX2-5P52952 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
NKX2-5P52952 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
NKX2-5P52952 RBM19-201ENST00000261741 4194 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
NKX2-5P52952 HRC-201ENST00000252825 2385 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
NKX2-5P52952 PAX8-202ENST00000263335 3735 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
NKX2-5P52952 AC027369.3-201ENST00000530465 3707 ntBASIC13.08□□□□□ -0.32
NKX2-5P52952 PLA2G6-202ENST00000335539 3060 ntTSL 5 BASIC13.08□□□□□ -0.32
NKX2-5P52952 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
NKX2-5P52952 PPP2R5E-201ENST00000337537 6659 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
NKX2-5P52952 CACNA1G-203ENST00000358244 7030 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
NKX2-5P52952 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC13.08□□□□□ -0.32
NKX2-5P52952 SAPCD2P4-201ENST00000424595 1171 ntBASIC13.08□□□□□ -0.32
NKX2-5P52952 PMS2P1-201ENST00000431037 1228 ntBASIC13.08□□□□□ -0.32
NKX2-5P52952 APTR-205ENST00000447009 902 ntTSL 2 BASIC13.08□□□□□ -0.32
NKX2-5P52952 FAM189A2-204ENST00000455972 2107 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
NKX2-5P52952 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC13.08□□□□□ -0.32
NKX2-5P52952 TK2-204ENST00000525974 1178 ntTSL 2 BASIC13.08□□□□□ -0.32
NKX2-5P52952 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC13.08□□□□□ -0.32
NKX2-5P52952 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.32
NKX2-5P52952 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
NKX2-5P52952 KCNJ9-201ENST00000368088 4170 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
NKX2-5P52952 SUPV3L1-201ENST00000359655 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
NKX2-5P52952 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
NKX2-5P52952 GPR107-208ENST00000610997 2813 ntTSL 5 BASIC13.08□□□□□ -0.32
NKX2-5P52952 CACNA1I-202ENST00000402142 10004 ntAPPRIS P4 TSL 1 (best) BASIC13.08□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms