Protein–RNA interactions for Protein: P52738

ZNF140, Zinc finger protein 140, humanhuman

Predicted RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF140P52738 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC15.28■□□□□ 0.04
ZNF140P52738 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ZNF140P52738 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC15.28■□□□□ 0.04
ZNF140P52738 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
ZNF140P52738 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
ZNF140P52738 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC15.28■□□□□ 0.04
ZNF140P52738 REXO1L5P-201ENST00000622260 2098 ntBASIC15.28■□□□□ 0.04
ZNF140P52738 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
ZNF140P52738 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
ZNF140P52738 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
ZNF140P52738 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC15.27■□□□□ 0.04
ZNF140P52738 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
ZNF140P52738 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
ZNF140P52738 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
ZNF140P52738 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
ZNF140P52738 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
ZNF140P52738 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC15.27■□□□□ 0.04
ZNF140P52738 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
ZNF140P52738 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
ZNF140P52738 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
ZNF140P52738 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
ZNF140P52738 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC15.27■□□□□ 0.04
ZNF140P52738 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
ZNF140P52738 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
ZNF140P52738 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC15.27■□□□□ 0.04
ZNF140P52738 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
ZNF140P52738 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
ZNF140P52738 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
ZNF140P52738 DGCR5-201ENST00000399539 862 ntBASIC15.27■□□□□ 0.04
ZNF140P52738 PES1-204ENST00000402284 2144 ntTSL 5 BASIC15.27■□□□□ 0.04
ZNF140P52738 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC15.27■□□□□ 0.04
ZNF140P52738 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC15.27■□□□□ 0.04
ZNF140P52738 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
ZNF140P52738 AP001582.1-201ENST00000525856 295 ntBASIC15.27■□□□□ 0.04
ZNF140P52738 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC15.27■□□□□ 0.04
ZNF140P52738 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC15.27■□□□□ 0.04
ZNF140P52738 PAM16-204ENST00000571941 674 ntTSL 3 BASIC15.27■□□□□ 0.04
ZNF140P52738 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC15.27■□□□□ 0.04
ZNF140P52738 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC15.27■□□□□ 0.04
ZNF140P52738 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
ZNF140P52738 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
ZNF140P52738 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
ZNF140P52738 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
ZNF140P52738 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
ZNF140P52738 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
ZNF140P52738 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
ZNF140P52738 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
ZNF140P52738 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
ZNF140P52738 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC15.27■□□□□ 0.03
ZNF140P52738 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC15.26■□□□□ 0.03
ZNF140P52738 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC15.26■□□□□ 0.03
ZNF140P52738 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
ZNF140P52738 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC15.26■□□□□ 0.03
ZNF140P52738 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
ZNF140P52738 AP002414.2-201ENST00000591780 3365 ntBASIC15.26■□□□□ 0.03
ZNF140P52738 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
ZNF140P52738 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
ZNF140P52738 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC15.26■□□□□ 0.03
ZNF140P52738 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
ZNF140P52738 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
ZNF140P52738 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
ZNF140P52738 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
ZNF140P52738 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
ZNF140P52738 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
ZNF140P52738 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
ZNF140P52738 RNU1-114P-201ENST00000365297 166 ntBASIC15.26■□□□□ 0.03
ZNF140P52738 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
ZNF140P52738 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC15.26■□□□□ 0.03
ZNF140P52738 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC15.26■□□□□ 0.03
ZNF140P52738 NUS1P3-201ENST00000423502 862 ntBASIC15.26■□□□□ 0.03
ZNF140P52738 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC15.26■□□□□ 0.03
ZNF140P52738 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC15.26■□□□□ 0.03
ZNF140P52738 AC138761.1-201ENST00000584393 385 ntBASIC15.26■□□□□ 0.03
ZNF140P52738 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
ZNF140P52738 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC15.26■□□□□ 0.03
ZNF140P52738 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
ZNF140P52738 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
ZNF140P52738 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC15.26■□□□□ 0.03
ZNF140P52738 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
ZNF140P52738 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
ZNF140P52738 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
ZNF140P52738 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
ZNF140P52738 FGD5P1-202ENST00000614866 2498 ntBASIC15.26■□□□□ 0.03
ZNF140P52738 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
ZNF140P52738 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC15.26■□□□□ 0.03
ZNF140P52738 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
ZNF140P52738 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC15.26■□□□□ 0.03
ZNF140P52738 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
ZNF140P52738 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC15.26■□□□□ 0.03
ZNF140P52738 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
ZNF140P52738 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
ZNF140P52738 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
ZNF140P52738 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC15.25■□□□□ 0.03
ZNF140P52738 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC15.25■□□□□ 0.03
ZNF140P52738 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
ZNF140P52738 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ZNF140P52738 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ZNF140P52738 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
ZNF140P52738 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
ZNF140P52738 AC023824.1-201ENST00000562945 2975 ntBASIC15.25■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms