Protein–RNA interactions for Protein: P51793

CLCN4, H(+)/Cl(-) exchange transporter 4, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4P51793 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.17
CLCN4P51793 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC16.08■□□□□ 0.17
CLCN4P51793 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
CLCN4P51793 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
CLCN4P51793 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC16.08■□□□□ 0.17
CLCN4P51793 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
CLCN4P51793 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CLCN4P51793 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC16.08■□□□□ 0.16
CLCN4P51793 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CLCN4P51793 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC16.08■□□□□ 0.16
CLCN4P51793 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC16.08■□□□□ 0.16
CLCN4P51793 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CLCN4P51793 AC010491.1-201ENST00000563101 2797 ntBASIC16.08■□□□□ 0.16
CLCN4P51793 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC16.08■□□□□ 0.16
CLCN4P51793 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CLCN4P51793 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CLCN4P51793 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CLCN4P51793 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CLCN4P51793 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC16.08■□□□□ 0.16
CLCN4P51793 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC16.08■□□□□ 0.16
CLCN4P51793 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC16.08■□□□□ 0.16
CLCN4P51793 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC16.08■□□□□ 0.16
CLCN4P51793 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC16.08■□□□□ 0.16
CLCN4P51793 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC16.08■□□□□ 0.16
CLCN4P51793 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC16.08■□□□□ 0.16
CLCN4P51793 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC16.08■□□□□ 0.16
CLCN4P51793 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC16.08■□□□□ 0.16
CLCN4P51793 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
CLCN4P51793 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CLCN4P51793 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC16.08■□□□□ 0.16
CLCN4P51793 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CLCN4P51793 ACE-203ENST00000413513 2237 ntTSL 2 BASIC16.08■□□□□ 0.16
CLCN4P51793 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
CLCN4P51793 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC16.08■□□□□ 0.16
CLCN4P51793 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
CLCN4P51793 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CLCN4P51793 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC16.08■□□□□ 0.16
CLCN4P51793 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
CLCN4P51793 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
CLCN4P51793 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CLCN4P51793 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CLCN4P51793 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CLCN4P51793 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC16.07■□□□□ 0.16
CLCN4P51793 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC16.07■□□□□ 0.16
CLCN4P51793 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
CLCN4P51793 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
CLCN4P51793 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CLCN4P51793 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC16.07■□□□□ 0.16
CLCN4P51793 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
CLCN4P51793 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC16.07■□□□□ 0.16
CLCN4P51793 CHMP1AP1-201ENST00000445563 662 ntBASIC16.07■□□□□ 0.16
CLCN4P51793 HIST2H2BB-201ENST00000449108 381 ntBASIC16.07■□□□□ 0.16
CLCN4P51793 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC16.07■□□□□ 0.16
CLCN4P51793 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CLCN4P51793 AC078852.2-201ENST00000504748 527 ntTSL 5 BASIC16.07■□□□□ 0.16
CLCN4P51793 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC16.07■□□□□ 0.16
CLCN4P51793 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
CLCN4P51793 AC005730.2-201ENST00000564549 1184 ntBASIC16.07■□□□□ 0.16
CLCN4P51793 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC16.07■□□□□ 0.16
CLCN4P51793 AP001002.3-201ENST00000623482 206 ntBASIC16.07■□□□□ 0.16
CLCN4P51793 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CLCN4P51793 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CLCN4P51793 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC16.07■□□□□ 0.16
CLCN4P51793 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC16.07■□□□□ 0.16
CLCN4P51793 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC16.07■□□□□ 0.16
CLCN4P51793 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CLCN4P51793 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CLCN4P51793 AC127383.1-201ENST00000444697 1800 ntBASIC16.07■□□□□ 0.16
CLCN4P51793 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC16.07■□□□□ 0.16
CLCN4P51793 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CLCN4P51793 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
CLCN4P51793 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC16.07■□□□□ 0.16
CLCN4P51793 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC16.07■□□□□ 0.16
CLCN4P51793 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC16.07■□□□□ 0.16
CLCN4P51793 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
CLCN4P51793 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CLCN4P51793 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CLCN4P51793 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CLCN4P51793 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC16.06■□□□□ 0.16
CLCN4P51793 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CLCN4P51793 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CLCN4P51793 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CLCN4P51793 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CLCN4P51793 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC16.06■□□□□ 0.16
CLCN4P51793 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC16.06■□□□□ 0.16
CLCN4P51793 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
CLCN4P51793 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CLCN4P51793 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CLCN4P51793 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC16.06■□□□□ 0.16
CLCN4P51793 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC16.06■□□□□ 0.16
CLCN4P51793 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC16.06■□□□□ 0.16
CLCN4P51793 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CLCN4P51793 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC16.06■□□□□ 0.16
CLCN4P51793 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CLCN4P51793 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CLCN4P51793 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CLCN4P51793 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CLCN4P51793 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC16.06■□□□□ 0.16
CLCN4P51793 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CLCN4P51793 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC16.06■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms