Protein–RNA interactions for Protein: P46736

BRCC3, Lys-63-specific deubiquitinase BRCC36, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P46736 GOLGA2P4-201ENST00000441462 777 ntBASIC16.29■□□□□ 0.2
BRCC3P46736 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC16.29■□□□□ 0.2
BRCC3P46736 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC16.29■□□□□ 0.2
BRCC3P46736 FAM8A2P-201ENST00000528813 1142 ntBASIC16.29■□□□□ 0.2
BRCC3P46736 AC004466.1-201ENST00000599515 1080 ntBASIC16.29■□□□□ 0.2
BRCC3P46736 AC091271.1-201ENST00000611877 1162 ntBASIC16.29■□□□□ 0.2
BRCC3P46736 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
BRCC3P46736 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
BRCC3P46736 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC16.29■□□□□ 0.2
BRCC3P46736 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
BRCC3P46736 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
BRCC3P46736 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
BRCC3P46736 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
BRCC3P46736 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
BRCC3P46736 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
BRCC3P46736 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
BRCC3P46736 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
BRCC3P46736 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
BRCC3P46736 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
BRCC3P46736 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC16.29■□□□□ 0.2
BRCC3P46736 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
BRCC3P46736 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
BRCC3P46736 AC020658.6-201ENST00000623564 1870 ntBASIC16.29■□□□□ 0.2
BRCC3P46736 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
BRCC3P46736 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC16.29■□□□□ 0.2
BRCC3P46736 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
BRCC3P46736 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
BRCC3P46736 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
BRCC3P46736 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC16.28■□□□□ 0.2
BRCC3P46736 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
BRCC3P46736 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
BRCC3P46736 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC16.28■□□□□ 0.2
BRCC3P46736 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
BRCC3P46736 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
BRCC3P46736 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
BRCC3P46736 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC16.28■□□□□ 0.2
BRCC3P46736 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
BRCC3P46736 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
BRCC3P46736 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC16.28■□□□□ 0.2
BRCC3P46736 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
BRCC3P46736 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
BRCC3P46736 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
BRCC3P46736 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
BRCC3P46736 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
BRCC3P46736 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
BRCC3P46736 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC16.28■□□□□ 0.2
BRCC3P46736 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
BRCC3P46736 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
BRCC3P46736 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
BRCC3P46736 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
BRCC3P46736 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
BRCC3P46736 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
BRCC3P46736 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC16.28■□□□□ 0.2
BRCC3P46736 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
BRCC3P46736 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC16.28■□□□□ 0.2
BRCC3P46736 CD8B2-202ENST00000417670 633 ntBASIC16.28■□□□□ 0.2
BRCC3P46736 POM121L8P-201ENST00000417732 1281 ntBASIC16.28■□□□□ 0.2
BRCC3P46736 POM121L9P-203ENST00000441984 1285 ntBASIC16.28■□□□□ 0.2
BRCC3P46736 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
BRCC3P46736 ACR-203ENST00000529621 708 ntTSL 5 BASIC16.28■□□□□ 0.2
BRCC3P46736 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC16.28■□□□□ 0.2
BRCC3P46736 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC16.28■□□□□ 0.2
BRCC3P46736 DERL2-202ENST00000570848 657 ntTSL 5 BASIC16.28■□□□□ 0.2
BRCC3P46736 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
BRCC3P46736 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC16.28■□□□□ 0.2
BRCC3P46736 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC16.28■□□□□ 0.2
BRCC3P46736 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC16.28■□□□□ 0.2
BRCC3P46736 ABBA01031663.1-201ENST00000635630 790 ntBASIC16.28■□□□□ 0.2
BRCC3P46736 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
BRCC3P46736 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
BRCC3P46736 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
BRCC3P46736 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
BRCC3P46736 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
BRCC3P46736 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC16.28■□□□□ 0.2
BRCC3P46736 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
BRCC3P46736 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
BRCC3P46736 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC16.28■□□□□ 0.2
BRCC3P46736 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
BRCC3P46736 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC16.28■□□□□ 0.2
BRCC3P46736 AC055811.4-201ENST00000624039 1754 ntBASIC16.28■□□□□ 0.2
BRCC3P46736 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC16.28■□□□□ 0.2
BRCC3P46736 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
BRCC3P46736 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
BRCC3P46736 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
BRCC3P46736 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC16.27■□□□□ 0.2
BRCC3P46736 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
BRCC3P46736 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
BRCC3P46736 AC087481.3-201ENST00000602886 1894 ntBASIC16.27■□□□□ 0.2
BRCC3P46736 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
BRCC3P46736 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
BRCC3P46736 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
BRCC3P46736 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
BRCC3P46736 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
BRCC3P46736 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
BRCC3P46736 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC16.27■□□□□ 0.2
BRCC3P46736 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
BRCC3P46736 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
BRCC3P46736 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC16.27■□□□□ 0.2
BRCC3P46736 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
BRCC3P46736 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms