Protein–RNA interactions for Protein: P40818

USP8, Ubiquitin carboxyl-terminal hydrolase 8, humanhuman

Predictions only

Length 1,118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP8P40818 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC16.88■□□□□ 0.29
USP8P40818 HLA-V-204ENST00000476601 1289 ntBASIC16.88■□□□□ 0.29
USP8P40818 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC16.88■□□□□ 0.29
USP8P40818 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
USP8P40818 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC16.88■□□□□ 0.29
USP8P40818 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
USP8P40818 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC16.88■□□□□ 0.29
USP8P40818 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
USP8P40818 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC16.88■□□□□ 0.29
USP8P40818 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
USP8P40818 ADAMTS7P1-201ENST00000613213 4793 ntBASIC16.88■□□□□ 0.29
USP8P40818 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
USP8P40818 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
USP8P40818 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
USP8P40818 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC16.88■□□□□ 0.29
USP8P40818 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
USP8P40818 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
USP8P40818 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC16.87■□□□□ 0.29
USP8P40818 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
USP8P40818 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
USP8P40818 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC16.87■□□□□ 0.29
USP8P40818 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
USP8P40818 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
USP8P40818 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
USP8P40818 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
USP8P40818 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
USP8P40818 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
USP8P40818 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
USP8P40818 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
USP8P40818 AC006486.2-201ENST00000624246 2199 ntBASIC16.87■□□□□ 0.29
USP8P40818 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
USP8P40818 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
USP8P40818 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
USP8P40818 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
USP8P40818 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
USP8P40818 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC16.87■□□□□ 0.29
USP8P40818 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC16.87■□□□□ 0.29
USP8P40818 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
USP8P40818 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC16.87■□□□□ 0.29
USP8P40818 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC16.87■□□□□ 0.29
USP8P40818 TEX28P1-201ENST00000613479 1221 ntBASIC16.87■□□□□ 0.29
USP8P40818 TEX28P2-201ENST00000617764 1221 ntBASIC16.87■□□□□ 0.29
USP8P40818 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
USP8P40818 HADH-212ENST00000638621 741 ntTSL 5 BASIC16.87■□□□□ 0.29
USP8P40818 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
USP8P40818 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC16.87■□□□□ 0.29
USP8P40818 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
USP8P40818 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC16.87■□□□□ 0.29
USP8P40818 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
USP8P40818 CHD1-212ENST00000614616 8095 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
USP8P40818 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
USP8P40818 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
USP8P40818 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC16.87■□□□□ 0.29
USP8P40818 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
USP8P40818 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
USP8P40818 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
USP8P40818 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC16.86■□□□□ 0.29
USP8P40818 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC16.86■□□□□ 0.29
USP8P40818 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC16.86■□□□□ 0.29
USP8P40818 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC16.86■□□□□ 0.29
USP8P40818 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
USP8P40818 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC16.86■□□□□ 0.29
USP8P40818 AC139749.1-202ENST00000617529 3139 ntBASIC16.86■□□□□ 0.29
USP8P40818 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
USP8P40818 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
USP8P40818 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC16.86■□□□□ 0.29
USP8P40818 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC16.86■□□□□ 0.29
USP8P40818 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
USP8P40818 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
USP8P40818 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
USP8P40818 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
USP8P40818 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
USP8P40818 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
USP8P40818 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC16.86■□□□□ 0.29
USP8P40818 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
USP8P40818 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
USP8P40818 TREML5P-201ENST00000421694 576 ntBASIC16.86■□□□□ 0.29
USP8P40818 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC16.86■□□□□ 0.29
USP8P40818 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC16.86■□□□□ 0.29
USP8P40818 RN7SL618P-201ENST00000477850 296 ntBASIC16.86■□□□□ 0.29
USP8P40818 AC067863.1-201ENST00000494933 530 ntBASIC16.86■□□□□ 0.29
USP8P40818 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC16.86■□□□□ 0.29
USP8P40818 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC16.86■□□□□ 0.29
USP8P40818 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC16.86■□□□□ 0.29
USP8P40818 IGHV3-42-201ENST00000520410 361 ntBASIC16.86■□□□□ 0.29
USP8P40818 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC16.86■□□□□ 0.29
USP8P40818 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC16.86■□□□□ 0.29
USP8P40818 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
USP8P40818 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC16.86■□□□□ 0.29
USP8P40818 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC16.86■□□□□ 0.29
USP8P40818 AC140878.1-201ENST00000565277 250 ntBASIC16.86■□□□□ 0.29
USP8P40818 AC051619.7-201ENST00000568314 623 ntBASIC16.86■□□□□ 0.29
USP8P40818 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC16.86■□□□□ 0.29
USP8P40818 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC16.86■□□□□ 0.29
USP8P40818 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
USP8P40818 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
USP8P40818 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC16.86■□□□□ 0.29
USP8P40818 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC16.86■□□□□ 0.29
USP8P40818 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
USP8P40818 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC16.86■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms