Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC19.24■□□□□ 0.67
COL15A1P39059 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
COL15A1P39059 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
COL15A1P39059 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC19.23■□□□□ 0.67
COL15A1P39059 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC19.23■□□□□ 0.67
COL15A1P39059 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
COL15A1P39059 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
COL15A1P39059 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
COL15A1P39059 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
COL15A1P39059 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
COL15A1P39059 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
COL15A1P39059 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
COL15A1P39059 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC19.23■□□□□ 0.67
COL15A1P39059 NPPA-201ENST00000376476 728 ntTSL 3 BASIC19.23■□□□□ 0.67
COL15A1P39059 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
COL15A1P39059 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
COL15A1P39059 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
COL15A1P39059 Z97180.1-201ENST00000445173 988 ntBASIC19.23■□□□□ 0.67
COL15A1P39059 C14orf132-202ENST00000553782 536 ntTSL 4 BASIC19.23■□□□□ 0.67
COL15A1P39059 CSH2-206ENST00000560142 749 ntTSL 5 BASIC19.23■□□□□ 0.67
COL15A1P39059 AC090386.1-202ENST00000586610 469 ntTSL 3 BASIC19.23■□□□□ 0.67
COL15A1P39059 AL133499.1-201ENST00000596207 608 ntBASIC19.23■□□□□ 0.67
COL15A1P39059 AL358472.3-201ENST00000608147 415 ntBASIC19.23■□□□□ 0.67
COL15A1P39059 AF254983.2-201ENST00000612331 135 ntBASIC19.23■□□□□ 0.67
COL15A1P39059 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
COL15A1P39059 WARS-232ENST00000556645 2508 ntTSL 5 BASIC19.23■□□□□ 0.67
COL15A1P39059 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
COL15A1P39059 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
COL15A1P39059 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
COL15A1P39059 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC19.23■□□□□ 0.67
COL15A1P39059 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC19.23■□□□□ 0.67
COL15A1P39059 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC19.23■□□□□ 0.67
COL15A1P39059 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
COL15A1P39059 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
COL15A1P39059 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
COL15A1P39059 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
COL15A1P39059 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC19.23■□□□□ 0.67
COL15A1P39059 REXO1L5P-201ENST00000622260 2098 ntBASIC19.22■□□□□ 0.67
COL15A1P39059 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC19.22■□□□□ 0.67
COL15A1P39059 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
COL15A1P39059 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
COL15A1P39059 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
COL15A1P39059 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
COL15A1P39059 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC19.22■□□□□ 0.67
COL15A1P39059 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC19.22■□□□□ 0.67
COL15A1P39059 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
COL15A1P39059 SLC16A6P1-201ENST00000413214 1059 ntBASIC19.22■□□□□ 0.67
COL15A1P39059 AC083949.1-201ENST00000422013 657 ntTSL 3 BASIC19.22■□□□□ 0.67
COL15A1P39059 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC19.22■□□□□ 0.67
COL15A1P39059 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC19.22■□□□□ 0.67
COL15A1P39059 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
COL15A1P39059 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
COL15A1P39059 AC016044.1-201ENST00000560818 572 ntTSL 4 BASIC19.22■□□□□ 0.67
COL15A1P39059 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC19.22■□□□□ 0.67
COL15A1P39059 AC105105.3-201ENST00000585470 646 ntTSL 5 BASIC19.22■□□□□ 0.67
COL15A1P39059 CROCCP3-204ENST00000590118 574 ntTSL 4 BASIC19.22■□□□□ 0.67
COL15A1P39059 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
COL15A1P39059 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC19.22■□□□□ 0.67
COL15A1P39059 AC006064.4-201ENST00000602946 422 ntTSL 2 BASIC19.22■□□□□ 0.67
COL15A1P39059 U62317.3-201ENST00000608319 855 ntBASIC19.22■□□□□ 0.67
COL15A1P39059 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC19.22■□□□□ 0.67
COL15A1P39059 AL162426.1-201ENST00000624141 743 ntBASIC19.22■□□□□ 0.67
COL15A1P39059 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
COL15A1P39059 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC19.22■□□□□ 0.67
COL15A1P39059 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
COL15A1P39059 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
COL15A1P39059 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
COL15A1P39059 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
COL15A1P39059 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
COL15A1P39059 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
COL15A1P39059 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
COL15A1P39059 AC004899.1-201ENST00000424687 1714 ntBASIC19.22■□□□□ 0.67
COL15A1P39059 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC19.22■□□□□ 0.67
COL15A1P39059 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
COL15A1P39059 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
COL15A1P39059 BCL2L13-206ENST00000399782 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
COL15A1P39059 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC19.22■□□□□ 0.67
COL15A1P39059 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC19.22■□□□□ 0.67
COL15A1P39059 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
COL15A1P39059 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
COL15A1P39059 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC19.22■□□□□ 0.67
COL15A1P39059 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
COL15A1P39059 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
COL15A1P39059 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
COL15A1P39059 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
COL15A1P39059 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
COL15A1P39059 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
COL15A1P39059 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
COL15A1P39059 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
COL15A1P39059 TMEM256-201ENST00000302422 486 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
COL15A1P39059 NUDT1-203ENST00000356714 662 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
COL15A1P39059 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC19.21■□□□□ 0.67
COL15A1P39059 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
COL15A1P39059 NUDT1-204ENST00000397046 712 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
COL15A1P39059 MAGEA5-201ENST00000446757 942 ntBASIC19.21■□□□□ 0.67
COL15A1P39059 AC026434.2-201ENST00000506094 1078 ntBASIC19.21■□□□□ 0.67
COL15A1P39059 MARK2P5-201ENST00000507649 634 ntBASIC19.21■□□□□ 0.67
COL15A1P39059 PRKXP1-201ENST00000561423 1122 ntBASIC19.21■□□□□ 0.67
COL15A1P39059 AC009955.4-201ENST00000597192 544 ntBASIC19.21■□□□□ 0.67
COL15A1P39059 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms