Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC15.3■□□□□ 0.04
HMGCLP35914 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC15.3■□□□□ 0.04
HMGCLP35914 NEU3-203ENST00000529024 581 ntTSL 3 BASIC15.3■□□□□ 0.04
HMGCLP35914 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC15.3■□□□□ 0.04
HMGCLP35914 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC15.3■□□□□ 0.04
HMGCLP35914 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC15.3■□□□□ 0.04
HMGCLP35914 AP001063.1-201ENST00000568332 529 ntBASIC15.3■□□□□ 0.04
HMGCLP35914 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC15.3■□□□□ 0.04
HMGCLP35914 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC15.3■□□□□ 0.04
HMGCLP35914 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
HMGCLP35914 METTL26-214ENST00000614890 801 ntTSL 3 BASIC15.3■□□□□ 0.04
HMGCLP35914 AP005019.2-201ENST00000615104 511 ntBASIC15.3■□□□□ 0.04
HMGCLP35914 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC15.3■□□□□ 0.04
HMGCLP35914 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
HMGCLP35914 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
HMGCLP35914 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HMGCLP35914 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HMGCLP35914 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HMGCLP35914 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
HMGCLP35914 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
HMGCLP35914 REXO1L2P-201ENST00000425429 2069 ntBASIC15.29■□□□□ 0.04
HMGCLP35914 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HMGCLP35914 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC15.29■□□□□ 0.04
HMGCLP35914 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
HMGCLP35914 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC15.29■□□□□ 0.04
HMGCLP35914 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
HMGCLP35914 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
HMGCLP35914 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
HMGCLP35914 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC15.29■□□□□ 0.04
HMGCLP35914 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HMGCLP35914 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HMGCLP35914 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HMGCLP35914 B9D1-203ENST00000395615 805 ntTSL 3 BASIC15.29■□□□□ 0.04
HMGCLP35914 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC15.29■□□□□ 0.04
HMGCLP35914 AL139094.1-201ENST00000405549 1188 ntBASIC15.29■□□□□ 0.04
HMGCLP35914 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
HMGCLP35914 AC114812.1-204ENST00000449669 728 ntBASIC15.29■□□□□ 0.04
HMGCLP35914 RN7SL752P-201ENST00000463779 287 ntBASIC15.29■□□□□ 0.04
HMGCLP35914 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
HMGCLP35914 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
HMGCLP35914 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC15.29■□□□□ 0.04
HMGCLP35914 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
HMGCLP35914 AC009486.1-201ENST00000569860 813 ntBASIC15.29■□□□□ 0.04
HMGCLP35914 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC15.29■□□□□ 0.04
HMGCLP35914 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC15.29■□□□□ 0.04
HMGCLP35914 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
HMGCLP35914 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
HMGCLP35914 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
HMGCLP35914 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC15.29■□□□□ 0.04
HMGCLP35914 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC15.29■□□□□ 0.04
HMGCLP35914 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HMGCLP35914 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HMGCLP35914 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
HMGCLP35914 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC15.29■□□□□ 0.04
HMGCLP35914 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
HMGCLP35914 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
HMGCLP35914 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HMGCLP35914 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HMGCLP35914 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HMGCLP35914 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC15.29■□□□□ 0.04
HMGCLP35914 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
HMGCLP35914 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC15.29■□□□□ 0.04
HMGCLP35914 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
HMGCLP35914 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HMGCLP35914 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
HMGCLP35914 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC15.28■□□□□ 0.04
HMGCLP35914 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
HMGCLP35914 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HMGCLP35914 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HMGCLP35914 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
HMGCLP35914 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HMGCLP35914 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC15.28■□□□□ 0.04
HMGCLP35914 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
HMGCLP35914 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
HMGCLP35914 CU639417.3-201ENST00000624240 1404 ntBASIC15.28■□□□□ 0.04
HMGCLP35914 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
HMGCLP35914 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HMGCLP35914 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HMGCLP35914 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC15.28■□□□□ 0.04
HMGCLP35914 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
HMGCLP35914 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
HMGCLP35914 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
HMGCLP35914 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
HMGCLP35914 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC15.28■□□□□ 0.04
HMGCLP35914 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HMGCLP35914 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC15.28■□□□□ 0.04
HMGCLP35914 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HMGCLP35914 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
HMGCLP35914 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
HMGCLP35914 ACTG1P3-201ENST00000431775 1114 ntBASIC15.28■□□□□ 0.04
HMGCLP35914 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC15.28■□□□□ 0.04
HMGCLP35914 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC15.28■□□□□ 0.04
HMGCLP35914 POLE2-203ENST00000553805 496 ntTSL 2 BASIC15.28■□□□□ 0.04
HMGCLP35914 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC15.28■□□□□ 0.04
HMGCLP35914 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC15.28■□□□□ 0.04
HMGCLP35914 LINC02084-201ENST00000606069 1096 ntBASIC15.28■□□□□ 0.04
HMGCLP35914 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
HMGCLP35914 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC15.28■□□□□ 0.04
HMGCLP35914 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HMGCLP35914 USE1-206ENST00000595101 1776 ntTSL 2 BASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms