Protein–RNA interactions for Protein: P35249

RFC4, Replication factor C subunit 4, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4P35249 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
RFC4P35249 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RFC4P35249 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RFC4P35249 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC19.09■□□□□ 0.65
RFC4P35249 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RFC4P35249 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC19.09■□□□□ 0.65
RFC4P35249 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC19.09■□□□□ 0.65
RFC4P35249 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RFC4P35249 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
RFC4P35249 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RFC4P35249 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
RFC4P35249 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
RFC4P35249 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
RFC4P35249 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RFC4P35249 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
RFC4P35249 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RFC4P35249 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
RFC4P35249 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
RFC4P35249 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
RFC4P35249 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC19.09■□□□□ 0.65
RFC4P35249 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC19.09■□□□□ 0.65
RFC4P35249 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
RFC4P35249 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC19.09■□□□□ 0.65
RFC4P35249 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RFC4P35249 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC19.09■□□□□ 0.65
RFC4P35249 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
RFC4P35249 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
RFC4P35249 CAPZB-201ENST00000264202 858 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
RFC4P35249 KDSR-201ENST00000326575 1024 ntTSL 2 BASIC19.09■□□□□ 0.65
RFC4P35249 AIMP2-202ENST00000395236 860 ntTSL 2 BASIC19.09■□□□□ 0.65
RFC4P35249 AL021707.5-201ENST00000420118 461 ntTSL 5 BASIC19.09■□□□□ 0.65
RFC4P35249 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
RFC4P35249 AC114501.1-201ENST00000445949 172 ntBASIC19.09■□□□□ 0.65
RFC4P35249 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC19.09■□□□□ 0.65
RFC4P35249 UBXN1-214ENST00000533000 367 ntTSL 5 BASIC19.09■□□□□ 0.65
RFC4P35249 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC19.09■□□□□ 0.65
RFC4P35249 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC19.09■□□□□ 0.65
RFC4P35249 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC19.09■□□□□ 0.65
RFC4P35249 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
RFC4P35249 HLA-C-210ENST00000640219 976 ntBASIC19.09■□□□□ 0.65
RFC4P35249 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RFC4P35249 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
RFC4P35249 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC19.09■□□□□ 0.65
RFC4P35249 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RFC4P35249 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RFC4P35249 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
RFC4P35249 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
RFC4P35249 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RFC4P35249 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
RFC4P35249 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RFC4P35249 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.65
RFC4P35249 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
RFC4P35249 CFAP36-201ENST00000339012 1373 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
RFC4P35249 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
RFC4P35249 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
RFC4P35249 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
RFC4P35249 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.65
RFC4P35249 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC19.08■□□□□ 0.65
RFC4P35249 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC19.08■□□□□ 0.65
RFC4P35249 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
RFC4P35249 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
RFC4P35249 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
RFC4P35249 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
RFC4P35249 INE2-201ENST00000630399 1874 ntBASIC19.08■□□□□ 0.65
RFC4P35249 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
RFC4P35249 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
RFC4P35249 AC073150.1-201ENST00000450406 1084 ntBASIC19.08■□□□□ 0.64
RFC4P35249 SIRT3-210ENST00000529382 1225 ntTSL 2 BASIC19.08■□□□□ 0.64
RFC4P35249 NEU3-205ENST00000531619 582 ntTSL 5 BASIC19.08■□□□□ 0.64
RFC4P35249 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
RFC4P35249 AC009779.1-201ENST00000551138 283 ntBASIC19.08■□□□□ 0.64
RFC4P35249 NPM1P43-201ENST00000558669 786 ntBASIC19.08■□□□□ 0.64
RFC4P35249 MIR4754-201ENST00000582477 89 ntBASIC19.08■□□□□ 0.64
RFC4P35249 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC19.08■□□□□ 0.64
RFC4P35249 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
RFC4P35249 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC19.08■□□□□ 0.64
RFC4P35249 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
RFC4P35249 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
RFC4P35249 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
RFC4P35249 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
RFC4P35249 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
RFC4P35249 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
RFC4P35249 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
RFC4P35249 TBC1D3J-201ENST00000620719 1426 ntBASIC19.08■□□□□ 0.64
RFC4P35249 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
RFC4P35249 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
RFC4P35249 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
RFC4P35249 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
RFC4P35249 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
RFC4P35249 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RFC4P35249 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC19.07■□□□□ 0.64
RFC4P35249 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC19.07■□□□□ 0.64
RFC4P35249 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RFC4P35249 AC009093.2-202ENST00000620513 2079 ntBASIC19.07■□□□□ 0.64
RFC4P35249 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC19.07■□□□□ 0.64
RFC4P35249 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
RFC4P35249 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
RFC4P35249 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RFC4P35249 RPAIN-201ENST00000327154 815 ntTSL 2 BASIC19.07■□□□□ 0.64
RFC4P35249 RPS16-202ENST00000339471 643 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 56.5 ms