Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
HOXC8P31273 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC16.5■□□□□ 0.23
HOXC8P31273 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC16.5■□□□□ 0.23
HOXC8P31273 AC244394.1-201ENST00000435000 1665 ntBASIC16.5■□□□□ 0.23
HOXC8P31273 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
HOXC8P31273 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HOXC8P31273 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC16.5■□□□□ 0.23
HOXC8P31273 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HOXC8P31273 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HOXC8P31273 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
HOXC8P31273 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC16.5■□□□□ 0.23
HOXC8P31273 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC16.5■□□□□ 0.23
HOXC8P31273 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HOXC8P31273 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HOXC8P31273 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
HOXC8P31273 AC091046.1-201ENST00000331871 207 ntBASIC16.5■□□□□ 0.23
HOXC8P31273 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HOXC8P31273 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC16.5■□□□□ 0.23
HOXC8P31273 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
HOXC8P31273 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
HOXC8P31273 AL596276.2-201ENST00000447525 331 ntBASIC16.5■□□□□ 0.23
HOXC8P31273 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC16.5■□□□□ 0.23
HOXC8P31273 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC16.5■□□□□ 0.23
HOXC8P31273 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC16.5■□□□□ 0.23
HOXC8P31273 ATP6V1G2-210ENST00000483251 662 ntTSL 3 BASIC16.5■□□□□ 0.23
HOXC8P31273 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC16.5■□□□□ 0.23
HOXC8P31273 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC16.5■□□□□ 0.23
HOXC8P31273 NUP210P1-202ENST00000504322 710 ntBASIC16.5■□□□□ 0.23
HOXC8P31273 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC16.5■□□□□ 0.23
HOXC8P31273 AC009779.1-201ENST00000551138 283 ntBASIC16.5■□□□□ 0.23
HOXC8P31273 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC16.5■□□□□ 0.23
HOXC8P31273 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC16.5■□□□□ 0.23
HOXC8P31273 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC16.5■□□□□ 0.23
HOXC8P31273 AC128714.1-201ENST00000637035 887 ntBASIC16.5■□□□□ 0.23
HOXC8P31273 PRAL-201ENST00000624952 3286 ntBASIC16.5■□□□□ 0.23
HOXC8P31273 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HOXC8P31273 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HOXC8P31273 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HOXC8P31273 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
HOXC8P31273 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC16.5■□□□□ 0.23
HOXC8P31273 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC16.5■□□□□ 0.23
HOXC8P31273 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HOXC8P31273 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
HOXC8P31273 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
HOXC8P31273 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
HOXC8P31273 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
HOXC8P31273 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
HOXC8P31273 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HOXC8P31273 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC16.49■□□□□ 0.23
HOXC8P31273 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
HOXC8P31273 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC16.49■□□□□ 0.23
HOXC8P31273 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
HOXC8P31273 FAH-201ENST00000261755 1471 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
HOXC8P31273 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HOXC8P31273 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HOXC8P31273 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
HOXC8P31273 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HOXC8P31273 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HOXC8P31273 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
HOXC8P31273 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HOXC8P31273 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HOXC8P31273 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
HOXC8P31273 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HOXC8P31273 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
HOXC8P31273 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
HOXC8P31273 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC16.49■□□□□ 0.23
HOXC8P31273 HLA-DQB2-229ENST00000411527 1059 ntBASIC16.49■□□□□ 0.23
HOXC8P31273 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC16.49■□□□□ 0.23
HOXC8P31273 PARVG-202ENST00000415224 999 ntTSL 2 BASIC16.49■□□□□ 0.23
HOXC8P31273 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC16.49■□□□□ 0.23
HOXC8P31273 CMC1-204ENST00000423894 549 ntTSL 2 BASIC16.49■□□□□ 0.23
HOXC8P31273 PTPA-217ENST00000434095 870 ntTSL 2 BASIC16.49■□□□□ 0.23
HOXC8P31273 BX324167.1-201ENST00000451118 805 ntTSL 5 BASIC16.49■□□□□ 0.23
HOXC8P31273 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC16.49■□□□□ 0.23
HOXC8P31273 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC16.49■□□□□ 0.23
HOXC8P31273 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC16.49■□□□□ 0.23
HOXC8P31273 AC106738.2-201ENST00000559802 557 ntTSL 4 BASIC16.49■□□□□ 0.23
HOXC8P31273 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC16.49■□□□□ 0.23
HOXC8P31273 FGFR3P5-201ENST00000564496 886 ntBASIC16.49■□□□□ 0.23
HOXC8P31273 PAM16-211ENST00000575848 518 ntTSL 3 BASIC16.49■□□□□ 0.23
HOXC8P31273 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
HOXC8P31273 AL136295.7-201ENST00000619226 1200 ntBASIC16.49■□□□□ 0.23
HOXC8P31273 AL021997.3-201ENST00000621053 557 ntAPPRIS P1 TSL 4 BASIC16.49■□□□□ 0.23
HOXC8P31273 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
HOXC8P31273 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
HOXC8P31273 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HOXC8P31273 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC16.49■□□□□ 0.23
HOXC8P31273 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC16.49■□□□□ 0.23
HOXC8P31273 AC023090.2-201ENST00000625182 2110 ntBASIC16.49■□□□□ 0.23
HOXC8P31273 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
HOXC8P31273 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
HOXC8P31273 FAM90A7P-201ENST00000382628 1395 ntBASIC16.49■□□□□ 0.23
HOXC8P31273 FAM90A23P-201ENST00000400136 1395 ntBASIC16.49■□□□□ 0.23
HOXC8P31273 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC16.49■□□□□ 0.23
HOXC8P31273 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
HOXC8P31273 AMT-239ENST00000636865 1914 ntTSL 5 BASIC16.49■□□□□ 0.23
HOXC8P31273 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
HOXC8P31273 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC16.48■□□□□ 0.23
HOXC8P31273 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
HOXC8P31273 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms