Protein–RNA interactions for Protein: P30408

TM4SF1, Transmembrane 4 L6 family member 1, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1P30408 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TM4SF1P30408 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
TM4SF1P30408 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC18.76■□□□□ 0.59
TM4SF1P30408 ATP5H-201ENST00000301587 603 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TM4SF1P30408 CNR1-201ENST00000362094 1252 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TM4SF1P30408 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
TM4SF1P30408 SERF2-209ENST00000409646 559 ntTSL 4 BASIC18.76■□□□□ 0.59
TM4SF1P30408 AC012360.1-201ENST00000433219 674 ntTSL 5 BASIC18.76■□□□□ 0.59
TM4SF1P30408 AL606489.1-201ENST00000443515 486 ntTSL 3 BASIC18.76■□□□□ 0.59
TM4SF1P30408 RPL7P35-201ENST00000446943 740 ntBASIC18.76■□□□□ 0.59
TM4SF1P30408 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC18.76■□□□□ 0.59
TM4SF1P30408 ERVK13-1-204ENST00000566343 567 ntTSL 4 BASIC18.76■□□□□ 0.59
TM4SF1P30408 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TM4SF1P30408 PARD6G-AS1-205ENST00000589574 647 ntTSL 3 BASIC18.76■□□□□ 0.59
TM4SF1P30408 GHRHR-212ENST00000611037 923 ntTSL 5 BASIC18.76■□□□□ 0.59
TM4SF1P30408 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TM4SF1P30408 FAM90A2P-201ENST00000511144 1395 ntBASIC18.76■□□□□ 0.59
TM4SF1P30408 FAM90A25P-201ENST00000528404 1395 ntBASIC18.76■□□□□ 0.59
TM4SF1P30408 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC18.76■□□□□ 0.59
TM4SF1P30408 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
TM4SF1P30408 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
TM4SF1P30408 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TM4SF1P30408 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
TM4SF1P30408 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TM4SF1P30408 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
TM4SF1P30408 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TM4SF1P30408 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
TM4SF1P30408 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TM4SF1P30408 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TM4SF1P30408 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
TM4SF1P30408 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TM4SF1P30408 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
TM4SF1P30408 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TM4SF1P30408 CICP13-201ENST00000422015 2789 ntBASIC18.75■□□□□ 0.59
TM4SF1P30408 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
TM4SF1P30408 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TM4SF1P30408 APOA1-202ENST00000359492 932 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
TM4SF1P30408 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
TM4SF1P30408 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC18.75■□□□□ 0.59
TM4SF1P30408 RPS9P1-201ENST00000419943 583 ntBASIC18.75■□□□□ 0.59
TM4SF1P30408 HPGD-203ENST00000422112 805 ntTSL 2 BASIC18.75■□□□□ 0.59
TM4SF1P30408 AC098934.1-204ENST00000430114 631 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
TM4SF1P30408 AC026320.2-201ENST00000434379 478 ntBASIC18.75■□□□□ 0.59
TM4SF1P30408 AC068134.1-201ENST00000441266 481 ntTSL 3 BASIC18.75■□□□□ 0.59
TM4SF1P30408 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC18.75■□□□□ 0.59
TM4SF1P30408 LINC00461-207ENST00000506978 564 ntTSL 5 BASIC18.75■□□□□ 0.59
TM4SF1P30408 AP002803.1-201ENST00000528836 498 ntBASIC18.75■□□□□ 0.59
TM4SF1P30408 FAM227B-210ENST00000560246 911 ntAPPRIS ALT2 TSL 3 BASIC18.75■□□□□ 0.59
TM4SF1P30408 AQP8-202ENST00000566125 1276 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
TM4SF1P30408 AC103808.5-201ENST00000577797 462 ntTSL 3 BASIC18.75■□□□□ 0.59
TM4SF1P30408 MIR3677-201ENST00000578964 60 ntBASIC18.75■□□□□ 0.59
TM4SF1P30408 MIR4649-201ENST00000582839 64 ntBASIC18.75■□□□□ 0.59
TM4SF1P30408 RPS15-202ENST00000585665 467 ntTSL 3 BASIC18.75■□□□□ 0.59
TM4SF1P30408 AC009884.2-201ENST00000603110 324 ntBASIC18.75■□□□□ 0.59
TM4SF1P30408 AL109837.1-201ENST00000603272 613 ntBASIC18.75■□□□□ 0.59
TM4SF1P30408 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC18.75■□□□□ 0.59
TM4SF1P30408 CAP2P1-201ENST00000557743 1390 ntBASIC18.75■□□□□ 0.59
TM4SF1P30408 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TM4SF1P30408 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
TM4SF1P30408 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC18.75■□□□□ 0.59
TM4SF1P30408 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TM4SF1P30408 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC18.75■□□□□ 0.59
TM4SF1P30408 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TM4SF1P30408 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
TM4SF1P30408 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TM4SF1P30408 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC18.75■□□□□ 0.59
TM4SF1P30408 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TM4SF1P30408 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TM4SF1P30408 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TM4SF1P30408 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC18.74■□□□□ 0.59
TM4SF1P30408 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC18.74■□□□□ 0.59
TM4SF1P30408 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TM4SF1P30408 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TM4SF1P30408 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
TM4SF1P30408 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TM4SF1P30408 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
TM4SF1P30408 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
TM4SF1P30408 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TM4SF1P30408 STK33-217ENST00000534493 1895 ntTSL 2 BASIC18.74■□□□□ 0.59
TM4SF1P30408 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TM4SF1P30408 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TM4SF1P30408 CMTM5-203ENST00000359320 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TM4SF1P30408 CXCL12-202ENST00000374426 470 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TM4SF1P30408 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
TM4SF1P30408 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
TM4SF1P30408 MDH2-205ENST00000461263 648 ntTSL 2 BASIC18.74■□□□□ 0.59
TM4SF1P30408 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC18.74■□□□□ 0.59
TM4SF1P30408 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC18.74■□□□□ 0.59
TM4SF1P30408 FAM104A-206ENST00000583024 417 ntTSL 3 BASIC18.74■□□□□ 0.59
TM4SF1P30408 ZNF286A-219ENST00000585194 607 ntTSL 4 BASIC18.74■□□□□ 0.59
TM4SF1P30408 HPN-206ENST00000597419 1212 ntTSL 5 BASIC18.74■□□□□ 0.59
TM4SF1P30408 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC18.74■□□□□ 0.59
TM4SF1P30408 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
TM4SF1P30408 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC18.74■□□□□ 0.59
TM4SF1P30408 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TM4SF1P30408 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC18.74■□□□□ 0.59
TM4SF1P30408 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TM4SF1P30408 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
TM4SF1P30408 SERF2-201ENST00000249786 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TM4SF1P30408 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 67.2 ms