Protein–RNA interactions for Protein: P26374

CHML, Rab proteins geranylgeranyltransferase component A 2, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMLP26374 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC18.53■□□□□ 0.56
CHMLP26374 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
CHMLP26374 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CHMLP26374 REXO1L5P-201ENST00000622260 2098 ntBASIC18.53■□□□□ 0.56
CHMLP26374 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CHMLP26374 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CHMLP26374 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC18.52■□□□□ 0.56
CHMLP26374 SF1-209ENST00000433274 2317 ntTSL 2 BASIC18.52■□□□□ 0.56
CHMLP26374 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CHMLP26374 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CHMLP26374 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CHMLP26374 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CHMLP26374 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC18.52■□□□□ 0.56
CHMLP26374 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CHMLP26374 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CHMLP26374 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CHMLP26374 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
CHMLP26374 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC18.52■□□□□ 0.56
CHMLP26374 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.56
CHMLP26374 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
CHMLP26374 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC18.52■□□□□ 0.56
CHMLP26374 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC18.52■□□□□ 0.56
CHMLP26374 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC18.52■□□□□ 0.56
CHMLP26374 OSM-203ENST00000403463 464 ntTSL 3 BASIC18.52■□□□□ 0.56
CHMLP26374 AC098850.1-201ENST00000419919 790 ntBASIC18.52■□□□□ 0.56
CHMLP26374 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC18.52■□□□□ 0.56
CHMLP26374 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC18.52■□□□□ 0.56
CHMLP26374 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CHMLP26374 AC093004.1-201ENST00000508850 424 ntBASIC18.52■□□□□ 0.56
CHMLP26374 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC18.52■□□□□ 0.56
CHMLP26374 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC18.52■□□□□ 0.56
CHMLP26374 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
CHMLP26374 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CHMLP26374 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
CHMLP26374 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC18.52■□□□□ 0.56
CHMLP26374 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC18.52■□□□□ 0.56
CHMLP26374 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC18.52■□□□□ 0.56
CHMLP26374 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.55
CHMLP26374 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CHMLP26374 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
CHMLP26374 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC18.52■□□□□ 0.55
CHMLP26374 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC18.52■□□□□ 0.55
CHMLP26374 AL158070.2-201ENST00000623713 1621 ntBASIC18.52■□□□□ 0.55
CHMLP26374 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
CHMLP26374 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CHMLP26374 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC18.52■□□□□ 0.55
CHMLP26374 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CHMLP26374 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
CHMLP26374 AC232323.1-201ENST00000540724 2099 ntBASIC18.51■□□□□ 0.55
CHMLP26374 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC18.51■□□□□ 0.55
CHMLP26374 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CHMLP26374 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
CHMLP26374 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
CHMLP26374 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
CHMLP26374 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CHMLP26374 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CHMLP26374 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
CHMLP26374 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CHMLP26374 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CHMLP26374 METTL26-204ENST00000397665 558 ntTSL 2 BASIC18.51■□□□□ 0.55
CHMLP26374 MPV17-208ENST00000405076 603 ntTSL 5 BASIC18.51■□□□□ 0.55
CHMLP26374 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC18.51■□□□□ 0.55
CHMLP26374 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
CHMLP26374 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC18.51■□□□□ 0.55
CHMLP26374 AC055876.2-201ENST00000531834 546 ntBASIC18.51■□□□□ 0.55
CHMLP26374 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC18.51■□□□□ 0.55
CHMLP26374 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC18.51■□□□□ 0.55
CHMLP26374 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC18.51■□□□□ 0.55
CHMLP26374 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC18.51■□□□□ 0.55
CHMLP26374 HFE2-206ENST00000634927 506 ntTSL 4 BASIC18.51■□□□□ 0.55
CHMLP26374 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CHMLP26374 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CHMLP26374 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CHMLP26374 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CHMLP26374 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CHMLP26374 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC18.51■□□□□ 0.55
CHMLP26374 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC18.51■□□□□ 0.55
CHMLP26374 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CHMLP26374 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
CHMLP26374 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CHMLP26374 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC18.51■□□□□ 0.55
CHMLP26374 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
CHMLP26374 AC007292.2-201ENST00000593524 1812 ntBASIC18.51■□□□□ 0.55
CHMLP26374 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC18.51■□□□□ 0.55
CHMLP26374 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
CHMLP26374 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
CHMLP26374 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CHMLP26374 AC018529.2-202ENST00000611482 3087 ntBASIC18.51■□□□□ 0.55
CHMLP26374 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC18.5■□□□□ 0.55
CHMLP26374 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
CHMLP26374 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
CHMLP26374 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
CHMLP26374 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CHMLP26374 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CHMLP26374 PES1-204ENST00000402284 2144 ntTSL 5 BASIC18.5■□□□□ 0.55
CHMLP26374 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
CHMLP26374 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
CHMLP26374 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CHMLP26374 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CHMLP26374 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms