Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
COL8A2P25067 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC13.02□□□□□ -0.32
COL8A2P25067 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC13.02□□□□□ -0.32
COL8A2P25067 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC13.02□□□□□ -0.32
COL8A2P25067 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
COL8A2P25067 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC13.02□□□□□ -0.32
COL8A2P25067 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
COL8A2P25067 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
COL8A2P25067 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
COL8A2P25067 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC13.02□□□□□ -0.33
COL8A2P25067 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
COL8A2P25067 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
COL8A2P25067 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC13.02□□□□□ -0.33
COL8A2P25067 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
COL8A2P25067 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
COL8A2P25067 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
COL8A2P25067 BRF1-202ENST00000379932 884 ntTSL 5 BASIC13.02□□□□□ -0.33
COL8A2P25067 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
COL8A2P25067 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC13.02□□□□□ -0.33
COL8A2P25067 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
COL8A2P25067 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC13.02□□□□□ -0.33
COL8A2P25067 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC13.02□□□□□ -0.33
COL8A2P25067 AC007551.1-201ENST00000457394 519 ntBASIC13.02□□□□□ -0.33
COL8A2P25067 PFN2-205ENST00000461868 613 ntTSL 2 BASIC13.02□□□□□ -0.33
COL8A2P25067 FTH1P14-201ENST00000482930 551 ntBASIC13.02□□□□□ -0.33
COL8A2P25067 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC13.02□□□□□ -0.33
COL8A2P25067 AC106760.1-201ENST00000508690 800 ntBASIC13.02□□□□□ -0.33
COL8A2P25067 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC13.02□□□□□ -0.33
COL8A2P25067 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
COL8A2P25067 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC13.02□□□□□ -0.33
COL8A2P25067 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC13.02□□□□□ -0.33
COL8A2P25067 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
COL8A2P25067 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC13.02□□□□□ -0.33
COL8A2P25067 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
COL8A2P25067 GPR39-203ENST00000622084 900 ntTSL 5 BASIC13.02□□□□□ -0.33
COL8A2P25067 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
COL8A2P25067 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC13.02□□□□□ -0.33
COL8A2P25067 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC13.02□□□□□ -0.33
COL8A2P25067 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC13.02□□□□□ -0.33
COL8A2P25067 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
COL8A2P25067 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
COL8A2P25067 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
COL8A2P25067 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
COL8A2P25067 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
COL8A2P25067 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
COL8A2P25067 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
COL8A2P25067 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
COL8A2P25067 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC13.02□□□□□ -0.33
COL8A2P25067 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
COL8A2P25067 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC13.02□□□□□ -0.33
COL8A2P25067 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
COL8A2P25067 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC13.02□□□□□ -0.33
COL8A2P25067 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
COL8A2P25067 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC13.02□□□□□ -0.33
COL8A2P25067 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC13.02□□□□□ -0.33
COL8A2P25067 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
COL8A2P25067 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
COL8A2P25067 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC13.01□□□□□ -0.33
COL8A2P25067 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
COL8A2P25067 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
COL8A2P25067 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
COL8A2P25067 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
COL8A2P25067 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
COL8A2P25067 AC016694.1-201ENST00000434179 700 ntBASIC13.01□□□□□ -0.33
COL8A2P25067 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC13.01□□□□□ -0.33
COL8A2P25067 AC022137.2-201ENST00000503482 481 ntBASIC13.01□□□□□ -0.33
COL8A2P25067 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC13.01□□□□□ -0.33
COL8A2P25067 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC13.01□□□□□ -0.33
COL8A2P25067 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC13.01□□□□□ -0.33
COL8A2P25067 BX539320.1-201ENST00000623759 877 ntBASIC13.01□□□□□ -0.33
COL8A2P25067 HADH-212ENST00000638621 741 ntTSL 5 BASIC13.01□□□□□ -0.33
COL8A2P25067 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
COL8A2P25067 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC13.01□□□□□ -0.33
COL8A2P25067 AC093525.8-201ENST00000624099 1342 ntBASIC13.01□□□□□ -0.33
COL8A2P25067 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
COL8A2P25067 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
COL8A2P25067 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
COL8A2P25067 AC084364.1-201ENST00000551967 1556 ntBASIC13.01□□□□□ -0.33
COL8A2P25067 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
COL8A2P25067 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
COL8A2P25067 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
COL8A2P25067 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC13.01□□□□□ -0.33
COL8A2P25067 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC13.01□□□□□ -0.33
COL8A2P25067 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC13.01□□□□□ -0.33
COL8A2P25067 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
COL8A2P25067 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC13.01□□□□□ -0.33
COL8A2P25067 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC13.01□□□□□ -0.33
COL8A2P25067 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
COL8A2P25067 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC13.01□□□□□ -0.33
COL8A2P25067 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
COL8A2P25067 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
COL8A2P25067 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
COL8A2P25067 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
COL8A2P25067 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
COL8A2P25067 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
COL8A2P25067 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
COL8A2P25067 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
COL8A2P25067 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC13.01□□□□□ -0.33
COL8A2P25067 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
COL8A2P25067 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms