Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
CSB-PGBD3P0DP91 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CSB-PGBD3P0DP91 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
CSB-PGBD3P0DP91 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
CSB-PGBD3P0DP91 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CSB-PGBD3P0DP91 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
CSB-PGBD3P0DP91 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC20.2■□□□□ 0.83
CSB-PGBD3P0DP91 PCDHA14-201ENST00000506751 2298 ntBASIC20.2■□□□□ 0.82
CSB-PGBD3P0DP91 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC20.2■□□□□ 0.82
CSB-PGBD3P0DP91 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CSB-PGBD3P0DP91 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CSB-PGBD3P0DP91 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CSB-PGBD3P0DP91 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CSB-PGBD3P0DP91 ING5-213ENST00000636051 4199 ntTSL 5 BASIC20.2■□□□□ 0.82
CSB-PGBD3P0DP91 C6orf136-202ENST00000376471 614 ntTSL 3 BASIC20.2■□□□□ 0.82
CSB-PGBD3P0DP91 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CSB-PGBD3P0DP91 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC20.2■□□□□ 0.82
CSB-PGBD3P0DP91 MESTP3-201ENST00000503460 968 ntBASIC20.2■□□□□ 0.82
CSB-PGBD3P0DP91 AC008443.1-201ENST00000511331 1000 ntTSL 3 BASIC20.2■□□□□ 0.82
CSB-PGBD3P0DP91 MBP-227ENST00000526111 581 ntTSL 4 BASIC20.2■□□□□ 0.82
CSB-PGBD3P0DP91 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC20.2■□□□□ 0.82
CSB-PGBD3P0DP91 C12orf73-211ENST00000553183 660 ntAPPRIS P1 TSL 3 BASIC20.2■□□□□ 0.82
CSB-PGBD3P0DP91 C14orf132-202ENST00000553782 536 ntTSL 4 BASIC20.2■□□□□ 0.82
CSB-PGBD3P0DP91 AL161670.2-201ENST00000557650 1227 ntBASIC20.2■□□□□ 0.82
CSB-PGBD3P0DP91 AL136301.1-201ENST00000615830 422 ntBASIC20.2■□□□□ 0.82
CSB-PGBD3P0DP91 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC20.2■□□□□ 0.82
CSB-PGBD3P0DP91 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CSB-PGBD3P0DP91 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CSB-PGBD3P0DP91 GCK-209ENST00000616242 2260 ntTSL 5 BASIC20.2■□□□□ 0.82
CSB-PGBD3P0DP91 AC006480.2-201ENST00000609770 1337 ntBASIC20.2■□□□□ 0.82
CSB-PGBD3P0DP91 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC20.2■□□□□ 0.82
CSB-PGBD3P0DP91 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC20.2■□□□□ 0.82
CSB-PGBD3P0DP91 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CSB-PGBD3P0DP91 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
CSB-PGBD3P0DP91 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
CSB-PGBD3P0DP91 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CSB-PGBD3P0DP91 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC20.2■□□□□ 0.82
CSB-PGBD3P0DP91 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CSB-PGBD3P0DP91 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CSB-PGBD3P0DP91 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CSB-PGBD3P0DP91 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
CSB-PGBD3P0DP91 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CSB-PGBD3P0DP91 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC20.19■□□□□ 0.82
CSB-PGBD3P0DP91 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC20.19■□□□□ 0.82
CSB-PGBD3P0DP91 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CSB-PGBD3P0DP91 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CSB-PGBD3P0DP91 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC20.19■□□□□ 0.82
CSB-PGBD3P0DP91 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
CSB-PGBD3P0DP91 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC20.19■□□□□ 0.82
CSB-PGBD3P0DP91 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CSB-PGBD3P0DP91 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CSB-PGBD3P0DP91 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
CSB-PGBD3P0DP91 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC20.19■□□□□ 0.82
CSB-PGBD3P0DP91 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CSB-PGBD3P0DP91 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CSB-PGBD3P0DP91 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
CSB-PGBD3P0DP91 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CSB-PGBD3P0DP91 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC20.19■□□□□ 0.82
CSB-PGBD3P0DP91 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CSB-PGBD3P0DP91 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC20.19■□□□□ 0.82
CSB-PGBD3P0DP91 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CSB-PGBD3P0DP91 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC20.19■□□□□ 0.82
CSB-PGBD3P0DP91 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC20.19■□□□□ 0.82
CSB-PGBD3P0DP91 AC091390.4-201ENST00000484974 491 ntTSL 3 BASIC20.19■□□□□ 0.82
CSB-PGBD3P0DP91 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC20.19■□□□□ 0.82
CSB-PGBD3P0DP91 CSH2-206ENST00000560142 749 ntTSL 5 BASIC20.19■□□□□ 0.82
CSB-PGBD3P0DP91 AC100827.2-201ENST00000563214 1194 ntBASIC20.19■□□□□ 0.82
CSB-PGBD3P0DP91 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CSB-PGBD3P0DP91 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CSB-PGBD3P0DP91 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC20.19■□□□□ 0.82
CSB-PGBD3P0DP91 AL645728.2-202ENST00000641679 227 ntBASIC20.19■□□□□ 0.82
CSB-PGBD3P0DP91 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CSB-PGBD3P0DP91 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
CSB-PGBD3P0DP91 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
CSB-PGBD3P0DP91 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CSB-PGBD3P0DP91 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
CSB-PGBD3P0DP91 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CSB-PGBD3P0DP91 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
CSB-PGBD3P0DP91 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CSB-PGBD3P0DP91 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
CSB-PGBD3P0DP91 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CSB-PGBD3P0DP91 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC20.18■□□□□ 0.82
CSB-PGBD3P0DP91 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC20.18■□□□□ 0.82
CSB-PGBD3P0DP91 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC20.18■□□□□ 0.82
CSB-PGBD3P0DP91 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC20.18■□□□□ 0.82
CSB-PGBD3P0DP91 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
CSB-PGBD3P0DP91 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
CSB-PGBD3P0DP91 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
CSB-PGBD3P0DP91 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
CSB-PGBD3P0DP91 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC20.18■□□□□ 0.82
CSB-PGBD3P0DP91 KAZN-204ENST00000400797 1295 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CSB-PGBD3P0DP91 HLA-K-203ENST00000430151 1046 ntBASIC20.18■□□□□ 0.82
CSB-PGBD3P0DP91 AC069218.1-201ENST00000435269 762 ntBASIC20.18■□□□□ 0.82
CSB-PGBD3P0DP91 WSPAR-201ENST00000513561 683 ntTSL 3 BASIC20.18■□□□□ 0.82
CSB-PGBD3P0DP91 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC20.18■□□□□ 0.82
CSB-PGBD3P0DP91 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC20.18■□□□□ 0.82
CSB-PGBD3P0DP91 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC20.18■□□□□ 0.82
CSB-PGBD3P0DP91 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC20.18■□□□□ 0.82
CSB-PGBD3P0DP91 AC008736.2-201ENST00000587554 516 ntTSL 2 BASIC20.18■□□□□ 0.82
CSB-PGBD3P0DP91 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC20.18■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms