Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CTSDP07339 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
CTSDP07339 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CTSDP07339 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CTSDP07339 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CTSDP07339 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC12.84□□□□□ -0.35
CTSDP07339 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CTSDP07339 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC12.84□□□□□ -0.35
CTSDP07339 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
CTSDP07339 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC12.84□□□□□ -0.35
CTSDP07339 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC12.84□□□□□ -0.35
CTSDP07339 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC12.84□□□□□ -0.35
CTSDP07339 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC12.84□□□□□ -0.35
CTSDP07339 MAL2-202ENST00000531508 892 ntTSL 3 BASIC12.84□□□□□ -0.35
CTSDP07339 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CTSDP07339 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC12.84□□□□□ -0.35
CTSDP07339 CMC2-214ENST00000565925 640 ntTSL 5 BASIC12.84□□□□□ -0.35
CTSDP07339 AC018845.2-201ENST00000568326 409 ntBASIC12.84□□□□□ -0.35
CTSDP07339 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC12.84□□□□□ -0.35
CTSDP07339 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC12.84□□□□□ -0.35
CTSDP07339 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC12.84□□□□□ -0.35
CTSDP07339 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
CTSDP07339 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
CTSDP07339 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CTSDP07339 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
CTSDP07339 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
CTSDP07339 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CTSDP07339 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
CTSDP07339 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
CTSDP07339 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
CTSDP07339 AC138969.3-201ENST00000546612 1459 ntBASIC12.84□□□□□ -0.35
CTSDP07339 AC138932.2-201ENST00000548268 1459 ntBASIC12.84□□□□□ -0.35
CTSDP07339 AC126755.4-201ENST00000549796 1459 ntBASIC12.84□□□□□ -0.35
CTSDP07339 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
CTSDP07339 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
CTSDP07339 AP001267.2-201ENST00000532619 2086 ntBASIC12.84□□□□□ -0.35
CTSDP07339 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
CTSDP07339 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC12.84□□□□□ -0.35
CTSDP07339 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.35
CTSDP07339 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
CTSDP07339 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
CTSDP07339 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
CTSDP07339 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC12.83□□□□□ -0.35
CTSDP07339 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
CTSDP07339 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
CTSDP07339 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
CTSDP07339 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
CTSDP07339 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
CTSDP07339 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CTSDP07339 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CTSDP07339 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
CTSDP07339 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CTSDP07339 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CTSDP07339 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
CTSDP07339 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CTSDP07339 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CTSDP07339 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC12.83□□□□□ -0.36
CTSDP07339 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CTSDP07339 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
CTSDP07339 NME4-207ENST00000450036 985 ntTSL 3 BASIC12.83□□□□□ -0.36
CTSDP07339 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC12.83□□□□□ -0.36
CTSDP07339 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CTSDP07339 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC12.83□□□□□ -0.36
CTSDP07339 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CTSDP07339 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC12.83□□□□□ -0.36
CTSDP07339 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
CTSDP07339 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
CTSDP07339 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
CTSDP07339 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CTSDP07339 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC12.83□□□□□ -0.36
CTSDP07339 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
CTSDP07339 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC12.83□□□□□ -0.36
CTSDP07339 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CTSDP07339 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC12.83□□□□□ -0.36
CTSDP07339 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CTSDP07339 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CTSDP07339 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC12.83□□□□□ -0.36
CTSDP07339 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CTSDP07339 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC12.83□□□□□ -0.36
CTSDP07339 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CTSDP07339 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CTSDP07339 TNN-203ENST00000622870 3719 ntTSL 5 BASIC12.83□□□□□ -0.36
CTSDP07339 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CTSDP07339 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CTSDP07339 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
CTSDP07339 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CTSDP07339 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
CTSDP07339 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CTSDP07339 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC12.82□□□□□ -0.36
CTSDP07339 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC12.82□□□□□ -0.36
CTSDP07339 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CTSDP07339 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC12.82□□□□□ -0.36
CTSDP07339 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC12.82□□□□□ -0.36
CTSDP07339 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
CTSDP07339 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CTSDP07339 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CTSDP07339 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC12.82□□□□□ -0.36
CTSDP07339 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC12.82□□□□□ -0.36
CTSDP07339 SF1-209ENST00000433274 2317 ntTSL 2 BASIC12.82□□□□□ -0.36
CTSDP07339 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 241.8 ms