Protein–RNA interactions for Protein: P02538

KRT6A, Keratin, type II cytoskeletal 6A, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6AP02538 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
KRT6AP02538 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
KRT6AP02538 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
KRT6AP02538 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
KRT6AP02538 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
KRT6AP02538 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
KRT6AP02538 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
KRT6AP02538 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
KRT6AP02538 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
KRT6AP02538 KRT18P13-201ENST00000400056 1290 ntBASIC14.99□□□□□ -0.01
KRT6AP02538 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
KRT6AP02538 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC14.99□□□□□ -0.01
KRT6AP02538 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC14.99□□□□□ -0.01
KRT6AP02538 RPL13P2-201ENST00000440687 659 ntBASIC14.99□□□□□ -0.01
KRT6AP02538 DNAJB3-202ENST00000449667 1266 ntBASIC14.99□□□□□ -0.01
KRT6AP02538 AC109322.1-201ENST00000524499 1264 ntBASIC14.99□□□□□ -0.01
KRT6AP02538 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
KRT6AP02538 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC14.99□□□□□ -0.01
KRT6AP02538 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC14.99□□□□□ -0.01
KRT6AP02538 UBL5-208ENST00000593087 320 ntTSL 3 BASIC14.99□□□□□ -0.01
KRT6AP02538 AC011467.4-201ENST00000594891 528 ntBASIC14.99□□□□□ -0.01
KRT6AP02538 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
KRT6AP02538 TEX28P1-201ENST00000613479 1221 ntBASIC14.99□□□□□ -0.01
KRT6AP02538 TEX28P2-201ENST00000617764 1221 ntBASIC14.99□□□□□ -0.01
KRT6AP02538 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC14.99□□□□□ -0.01
KRT6AP02538 AC073592.8-201ENST00000624126 511 ntBASIC14.99□□□□□ -0.01
KRT6AP02538 Z92544.3-201ENST00000624747 417 ntBASIC14.99□□□□□ -0.01
KRT6AP02538 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
KRT6AP02538 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC14.99□□□□□ -0.01
KRT6AP02538 LINC00528-201ENST00000600723 2160 ntBASIC14.99□□□□□ -0.01
KRT6AP02538 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
KRT6AP02538 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC14.99□□□□□ -0.01
KRT6AP02538 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
KRT6AP02538 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
KRT6AP02538 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
KRT6AP02538 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
KRT6AP02538 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
KRT6AP02538 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
KRT6AP02538 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC14.99□□□□□ -0.01
KRT6AP02538 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
KRT6AP02538 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
KRT6AP02538 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
KRT6AP02538 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
KRT6AP02538 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
KRT6AP02538 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC14.98□□□□□ -0.01
KRT6AP02538 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
KRT6AP02538 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC14.98□□□□□ -0.01
KRT6AP02538 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
KRT6AP02538 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
KRT6AP02538 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
KRT6AP02538 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
KRT6AP02538 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
KRT6AP02538 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC14.98□□□□□ -0.01
KRT6AP02538 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
KRT6AP02538 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
KRT6AP02538 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC14.98□□□□□ -0.01
KRT6AP02538 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC14.98□□□□□ -0.01
KRT6AP02538 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC14.98□□□□□ -0.01
KRT6AP02538 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
KRT6AP02538 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
KRT6AP02538 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
KRT6AP02538 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
KRT6AP02538 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC14.98□□□□□ -0.01
KRT6AP02538 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
KRT6AP02538 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
KRT6AP02538 KRT18P64-201ENST00000434946 1219 ntBASIC14.98□□□□□ -0.01
KRT6AP02538 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC14.98□□□□□ -0.01
KRT6AP02538 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC14.98□□□□□ -0.01
KRT6AP02538 KRT18P43-201ENST00000469825 1281 ntBASIC14.98□□□□□ -0.01
KRT6AP02538 AC125807.1-201ENST00000483097 614 ntBASIC14.98□□□□□ -0.01
KRT6AP02538 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC14.98□□□□□ -0.01
KRT6AP02538 SDHAP3-202ENST00000515467 728 ntBASIC14.98□□□□□ -0.01
KRT6AP02538 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC14.98□□□□□ -0.01
KRT6AP02538 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC14.98□□□□□ -0.01
KRT6AP02538 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC14.98□□□□□ -0.01
KRT6AP02538 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC14.98□□□□□ -0.01
KRT6AP02538 AC051619.7-201ENST00000568314 623 ntBASIC14.98□□□□□ -0.01
KRT6AP02538 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC14.98□□□□□ -0.01
KRT6AP02538 AL138828.2-201ENST00000615812 383 ntBASIC14.98□□□□□ -0.01
KRT6AP02538 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC14.98□□□□□ -0.01
KRT6AP02538 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
KRT6AP02538 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
KRT6AP02538 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
KRT6AP02538 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
KRT6AP02538 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
KRT6AP02538 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
KRT6AP02538 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
KRT6AP02538 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
KRT6AP02538 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
KRT6AP02538 CICP23-201ENST00000605013 2741 ntBASIC14.98□□□□□ -0.01
KRT6AP02538 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
KRT6AP02538 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC14.98□□□□□ -0.01
KRT6AP02538 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC14.97□□□□□ -0.01
KRT6AP02538 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
KRT6AP02538 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
KRT6AP02538 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
KRT6AP02538 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
KRT6AP02538 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
KRT6AP02538 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC14.97□□□□□ -0.01
KRT6AP02538 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms