Protein–RNA interactions for Protein: O95025

SEMA3D, Semaphorin-3D, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3DO95025 AC092183.1-201ENST00000469884 875 ntBASIC14.82□□□□□ -0.04
SEMA3DO95025 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC14.82□□□□□ -0.04
SEMA3DO95025 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC14.82□□□□□ -0.04
SEMA3DO95025 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SEMA3DO95025 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC14.82□□□□□ -0.04
SEMA3DO95025 AC011467.4-201ENST00000594891 528 ntBASIC14.82□□□□□ -0.04
SEMA3DO95025 AC025181.2-201ENST00000606994 802 ntBASIC14.82□□□□□ -0.04
SEMA3DO95025 ORC5-208ENST00000626700 344 ntTSL 3 BASIC14.82□□□□□ -0.04
SEMA3DO95025 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC14.82□□□□□ -0.04
SEMA3DO95025 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SEMA3DO95025 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SEMA3DO95025 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
SEMA3DO95025 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
SEMA3DO95025 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC14.82□□□□□ -0.04
SEMA3DO95025 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SEMA3DO95025 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SEMA3DO95025 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC14.82□□□□□ -0.04
SEMA3DO95025 WASH3P-207ENST00000560956 1394 ntBASIC14.82□□□□□ -0.04
SEMA3DO95025 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SEMA3DO95025 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC14.82□□□□□ -0.04
SEMA3DO95025 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC14.82□□□□□ -0.04
SEMA3DO95025 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SEMA3DO95025 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
SEMA3DO95025 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SEMA3DO95025 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
SEMA3DO95025 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SEMA3DO95025 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
SEMA3DO95025 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SEMA3DO95025 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SEMA3DO95025 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SEMA3DO95025 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC14.82□□□□□ -0.04
SEMA3DO95025 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
SEMA3DO95025 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC14.81□□□□□ -0.04
SEMA3DO95025 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SEMA3DO95025 SACM1L-201ENST00000389061 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SEMA3DO95025 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC14.81□□□□□ -0.04
SEMA3DO95025 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC14.81□□□□□ -0.04
SEMA3DO95025 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC14.81□□□□□ -0.04
SEMA3DO95025 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC14.81□□□□□ -0.04
SEMA3DO95025 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SEMA3DO95025 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
SEMA3DO95025 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
SEMA3DO95025 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
SEMA3DO95025 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC14.81□□□□□ -0.04
SEMA3DO95025 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC14.81□□□□□ -0.04
SEMA3DO95025 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SEMA3DO95025 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
SEMA3DO95025 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC14.81□□□□□ -0.04
SEMA3DO95025 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC14.81□□□□□ -0.04
SEMA3DO95025 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC14.81□□□□□ -0.04
SEMA3DO95025 BASP1P1-201ENST00000430708 665 ntBASIC14.81□□□□□ -0.04
SEMA3DO95025 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC14.81□□□□□ -0.04
SEMA3DO95025 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC14.81□□□□□ -0.04
SEMA3DO95025 MEIS3P1-201ENST00000495167 958 ntBASIC14.81□□□□□ -0.04
SEMA3DO95025 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC14.81□□□□□ -0.04
SEMA3DO95025 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC14.81□□□□□ -0.04
SEMA3DO95025 RFPL4AP1-201ENST00000530883 850 ntBASIC14.81□□□□□ -0.04
SEMA3DO95025 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC14.81□□□□□ -0.04
SEMA3DO95025 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC14.81□□□□□ -0.04
SEMA3DO95025 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SEMA3DO95025 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC14.81□□□□□ -0.04
SEMA3DO95025 AL390955.2-201ENST00000603032 514 ntBASIC14.81□□□□□ -0.04
SEMA3DO95025 AC106028.4-201ENST00000614509 607 ntBASIC14.81□□□□□ -0.04
SEMA3DO95025 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC14.81□□□□□ -0.04
SEMA3DO95025 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC14.81□□□□□ -0.04
SEMA3DO95025 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
SEMA3DO95025 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC14.81□□□□□ -0.04
SEMA3DO95025 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC14.81□□□□□ -0.04
SEMA3DO95025 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SEMA3DO95025 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
SEMA3DO95025 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SEMA3DO95025 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SEMA3DO95025 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
SEMA3DO95025 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
SEMA3DO95025 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
SEMA3DO95025 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SEMA3DO95025 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC14.81□□□□□ -0.04
SEMA3DO95025 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC14.81□□□□□ -0.04
SEMA3DO95025 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SEMA3DO95025 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SEMA3DO95025 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC14.81□□□□□ -0.04
SEMA3DO95025 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SEMA3DO95025 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SEMA3DO95025 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
SEMA3DO95025 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SEMA3DO95025 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SEMA3DO95025 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
SEMA3DO95025 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC14.81□□□□□ -0.04
SEMA3DO95025 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
SEMA3DO95025 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SEMA3DO95025 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
SEMA3DO95025 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SEMA3DO95025 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC14.8□□□□□ -0.04
SEMA3DO95025 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SEMA3DO95025 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SEMA3DO95025 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC14.8□□□□□ -0.04
SEMA3DO95025 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC14.8□□□□□ -0.04
SEMA3DO95025 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SEMA3DO95025 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC14.8□□□□□ -0.04
SEMA3DO95025 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms