Protein–RNA interactions for Protein: O60902

SHOX2, Short stature homeobox protein 2, humanhuman

Predicted RBP Predictions only

Length 331 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2O60902 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC15.42■□□□□ 0.06
SHOX2O60902 CICP16-201ENST00000502609 2813 ntBASIC15.42■□□□□ 0.06
SHOX2O60902 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
SHOX2O60902 CREB3L4-204ENST00000368603 1557 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
SHOX2O60902 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC15.42■□□□□ 0.06
SHOX2O60902 SPPL2B-209ENST00000613503 3456 ntAPPRIS P4 TSL 1 (best) BASIC15.42■□□□□ 0.06
SHOX2O60902 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SHOX2O60902 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SHOX2O60902 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC15.42■□□□□ 0.06
SHOX2O60902 KLK8-202ENST00000320838 456 ntTSL 5 BASIC15.42■□□□□ 0.06
SHOX2O60902 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SHOX2O60902 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
SHOX2O60902 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC15.42■□□□□ 0.06
SHOX2O60902 MED22-202ENST00000371999 987 ntTSL 3 BASIC15.42■□□□□ 0.06
SHOX2O60902 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC15.42■□□□□ 0.06
SHOX2O60902 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SHOX2O60902 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC15.42■□□□□ 0.06
SHOX2O60902 LSM5-204ENST00000409909 740 ntTSL 2 BASIC15.42■□□□□ 0.06
SHOX2O60902 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
SHOX2O60902 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC15.42■□□□□ 0.06
SHOX2O60902 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC15.42■□□□□ 0.06
SHOX2O60902 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC15.42■□□□□ 0.06
SHOX2O60902 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC15.42■□□□□ 0.06
SHOX2O60902 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC15.42■□□□□ 0.06
SHOX2O60902 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC15.42■□□□□ 0.06
SHOX2O60902 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC15.42■□□□□ 0.06
SHOX2O60902 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC15.42■□□□□ 0.06
SHOX2O60902 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC15.42■□□□□ 0.06
SHOX2O60902 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC15.42■□□□□ 0.06
SHOX2O60902 SF1-205ENST00000377394 2854 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
SHOX2O60902 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC15.42■□□□□ 0.06
SHOX2O60902 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
SHOX2O60902 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
SHOX2O60902 AAR2-202ENST00000373932 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SHOX2O60902 ACTR2-202ENST00000377982 2685 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
SHOX2O60902 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SHOX2O60902 POMT1-201ENST00000341012 2912 ntTSL 2 BASIC15.42■□□□□ 0.06
SHOX2O60902 EHMT2-204ENST00000395728 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
SHOX2O60902 B3GNT5-202ENST00000460419 3368 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
SHOX2O60902 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SHOX2O60902 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SHOX2O60902 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
SHOX2O60902 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC15.42■□□□□ 0.06
SHOX2O60902 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SHOX2O60902 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
SHOX2O60902 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC15.42■□□□□ 0.06
SHOX2O60902 SUV39H2-201ENST00000313519 3087 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
SHOX2O60902 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SHOX2O60902 ADAM17-203ENST00000497134 1873 ntTSL 5 BASIC15.42■□□□□ 0.06
SHOX2O60902 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC15.42■□□□□ 0.06
SHOX2O60902 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC15.41■□□□□ 0.06
SHOX2O60902 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SHOX2O60902 RAVER1-206ENST00000611074 3586 ntAPPRIS P2 TSL 5 BASIC15.41■□□□□ 0.06
SHOX2O60902 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC15.41■□□□□ 0.06
SHOX2O60902 OR2I1P-209ENST00000641730 5365 ntBASIC15.41■□□□□ 0.06
SHOX2O60902 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
SHOX2O60902 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
SHOX2O60902 PP14571-202ENST00000404891 2017 ntTSL 2 BASIC15.41■□□□□ 0.06
SHOX2O60902 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC15.41■□□□□ 0.06
SHOX2O60902 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
SHOX2O60902 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SHOX2O60902 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
SHOX2O60902 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SHOX2O60902 AL118506.1-201ENST00000601296 3082 ntBASIC15.41■□□□□ 0.06
SHOX2O60902 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SHOX2O60902 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SHOX2O60902 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
SHOX2O60902 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
SHOX2O60902 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SHOX2O60902 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC15.41■□□□□ 0.06
SHOX2O60902 UBE3A-209ENST00000625778 3217 ntTSL 5 BASIC15.41■□□□□ 0.06
SHOX2O60902 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
SHOX2O60902 SFMBT2-203ENST00000379713 2402 ntTSL 2 BASIC15.41■□□□□ 0.06
SHOX2O60902 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SHOX2O60902 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
SHOX2O60902 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
SHOX2O60902 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
SHOX2O60902 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC15.41■□□□□ 0.06
SHOX2O60902 AC109635.5-201ENST00000533593 962 ntBASIC15.41■□□□□ 0.06
SHOX2O60902 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
SHOX2O60902 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
SHOX2O60902 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC15.41■□□□□ 0.06
SHOX2O60902 COQ9-214ENST00000567933 882 ntTSL 3 BASIC15.41■□□□□ 0.06
SHOX2O60902 RNF151-202ENST00000569210 853 ntTSL 2 BASIC15.41■□□□□ 0.06
SHOX2O60902 MTDHP4-201ENST00000600287 670 ntBASIC15.41■□□□□ 0.06
SHOX2O60902 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC15.41■□□□□ 0.06
SHOX2O60902 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC15.41■□□□□ 0.06
SHOX2O60902 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
SHOX2O60902 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
SHOX2O60902 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC15.41■□□□□ 0.06
SHOX2O60902 SPATA7-217ENST00000556553 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
SHOX2O60902 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SHOX2O60902 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC15.41■□□□□ 0.06
SHOX2O60902 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
SHOX2O60902 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC15.41■□□□□ 0.06
SHOX2O60902 KRT8P37-201ENST00000451609 1420 ntBASIC15.41■□□□□ 0.06
SHOX2O60902 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
SHOX2O60902 TOLLIP-202ENST00000317204 3617 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SHOX2O60902 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
SHOX2O60902 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC15.41■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 56.6 ms