Protein–RNA interactions for Protein: O43623

SNAI2, Zinc finger protein SNAI2, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI2O43623 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
SNAI2O43623 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
SNAI2O43623 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
SNAI2O43623 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
SNAI2O43623 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC11.62□□□□□ -0.55
SNAI2O43623 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC11.62□□□□□ -0.55
SNAI2O43623 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC11.62□□□□□ -0.55
SNAI2O43623 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
SNAI2O43623 GAB2-202ENST00000361507 6092 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
SNAI2O43623 GNAS-213ENST00000371099 3709 ntTSL 5 BASIC11.62□□□□□ -0.55
SNAI2O43623 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC11.62□□□□□ -0.55
SNAI2O43623 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
SNAI2O43623 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
SNAI2O43623 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC11.62□□□□□ -0.55
SNAI2O43623 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
SNAI2O43623 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
SNAI2O43623 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC11.62□□□□□ -0.55
SNAI2O43623 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC11.62□□□□□ -0.55
SNAI2O43623 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC11.62□□□□□ -0.55
SNAI2O43623 IGLL3P-201ENST00000412472 434 ntBASIC11.62□□□□□ -0.55
SNAI2O43623 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC11.62□□□□□ -0.55
SNAI2O43623 HNRNPDP1-201ENST00000439535 754 ntBASIC11.62□□□□□ -0.55
SNAI2O43623 VN2R19P-201ENST00000442399 1052 ntBASIC11.62□□□□□ -0.55
SNAI2O43623 RNF146-204ENST00000476956 884 ntTSL 2 BASIC11.62□□□□□ -0.55
SNAI2O43623 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC11.62□□□□□ -0.55
SNAI2O43623 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC11.62□□□□□ -0.55
SNAI2O43623 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
SNAI2O43623 BMF-207ENST00000559701 630 ntTSL 3 BASIC11.62□□□□□ -0.55
SNAI2O43623 PAM16-215ENST00000577031 548 ntTSL 4 BASIC11.62□□□□□ -0.55
SNAI2O43623 CD7-202ENST00000578509 925 ntTSL 3 BASIC11.62□□□□□ -0.55
SNAI2O43623 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC11.62□□□□□ -0.55
SNAI2O43623 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC11.62□□□□□ -0.55
SNAI2O43623 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC11.62□□□□□ -0.55
SNAI2O43623 HSPH1-202ENST00000380405 3480 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
SNAI2O43623 NDRG4-255ENST00000570248 3207 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
SNAI2O43623 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
SNAI2O43623 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
SNAI2O43623 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
SNAI2O43623 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
SNAI2O43623 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
SNAI2O43623 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC11.62□□□□□ -0.55
SNAI2O43623 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
SNAI2O43623 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
SNAI2O43623 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC11.62□□□□□ -0.55
SNAI2O43623 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC11.62□□□□□ -0.55
SNAI2O43623 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC11.62□□□□□ -0.55
SNAI2O43623 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC11.62□□□□□ -0.55
SNAI2O43623 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC11.62□□□□□ -0.55
SNAI2O43623 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC11.62□□□□□ -0.55
SNAI2O43623 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
SNAI2O43623 AL359643.2-201ENST00000606227 3273 ntTSL 2 BASIC11.62□□□□□ -0.55
SNAI2O43623 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
SNAI2O43623 KIRREL3-205ENST00000529097 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
SNAI2O43623 BNIP3P1-202ENST00000550043 1585 ntBASIC11.62□□□□□ -0.55
SNAI2O43623 AC018892.3-201ENST00000623986 2499 ntBASIC11.62□□□□□ -0.55
SNAI2O43623 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
SNAI2O43623 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC11.62□□□□□ -0.55
SNAI2O43623 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC11.62□□□□□ -0.55
SNAI2O43623 USP19-202ENST00000398888 4559 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
SNAI2O43623 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
SNAI2O43623 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
SNAI2O43623 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC11.62□□□□□ -0.55
SNAI2O43623 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
SNAI2O43623 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
SNAI2O43623 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
SNAI2O43623 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
SNAI2O43623 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC11.61□□□□□ -0.55
SNAI2O43623 TP73-211ENST00000604074 4806 ntTSL 5 BASIC11.61□□□□□ -0.55
SNAI2O43623 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC11.61□□□□□ -0.55
SNAI2O43623 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
SNAI2O43623 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC11.61□□□□□ -0.55
SNAI2O43623 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC11.61□□□□□ -0.55
SNAI2O43623 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
SNAI2O43623 SOAT1-204ENST00000540564 6861 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
SNAI2O43623 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
SNAI2O43623 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
SNAI2O43623 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
SNAI2O43623 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
SNAI2O43623 AMT-204ENST00000427987 1646 ntTSL 5 BASIC11.61□□□□□ -0.55
SNAI2O43623 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
SNAI2O43623 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
SNAI2O43623 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
SNAI2O43623 TMEM2-202ENST00000377044 6523 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
SNAI2O43623 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
SNAI2O43623 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
SNAI2O43623 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC11.61□□□□□ -0.55
SNAI2O43623 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
SNAI2O43623 CASC10-201ENST00000377113 3801 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
SNAI2O43623 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC11.61□□□□□ -0.55
SNAI2O43623 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
SNAI2O43623 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC11.61□□□□□ -0.55
SNAI2O43623 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC11.61□□□□□ -0.55
SNAI2O43623 RHOQP3-201ENST00000437982 621 ntBASIC11.61□□□□□ -0.55
SNAI2O43623 AC140658.5-201ENST00000438532 169 ntBASIC11.61□□□□□ -0.55
SNAI2O43623 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
SNAI2O43623 TOLLIP-AS1-201ENST00000530897 939 ntBASIC11.61□□□□□ -0.55
SNAI2O43623 CD63-210ENST00000550776 870 ntTSL 5 BASIC11.61□□□□□ -0.55
SNAI2O43623 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC11.61□□□□□ -0.55
SNAI2O43623 TPM1-226ENST00000560959 925 ntTSL 2 BASIC11.61□□□□□ -0.55
SNAI2O43623 AC096734.2-201ENST00000562054 433 ntBASIC11.61□□□□□ -0.55
Retrieved 100 of 98,524 protein–RNA pairs in 62.5 ms