Protein–RNA interactions for Protein: O43556

SGCE, Epsilon-sarcoglycan, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCEO43556 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC13.73□□□□□ -0.21
SGCEO43556 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
SGCEO43556 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC13.73□□□□□ -0.21
SGCEO43556 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC13.73□□□□□ -0.21
SGCEO43556 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC13.73□□□□□ -0.21
SGCEO43556 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SGCEO43556 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SGCEO43556 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC13.73□□□□□ -0.21
SGCEO43556 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
SGCEO43556 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
SGCEO43556 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
SGCEO43556 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
SGCEO43556 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
SGCEO43556 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SGCEO43556 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
SGCEO43556 C18orf15-201ENST00000623680 2534 ntBASIC13.72□□□□□ -0.21
SGCEO43556 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
SGCEO43556 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
SGCEO43556 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
SGCEO43556 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
SGCEO43556 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC13.72□□□□□ -0.21
SGCEO43556 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC13.72□□□□□ -0.21
SGCEO43556 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
SGCEO43556 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
SGCEO43556 AL109954.1-202ENST00000564051 2148 ntBASIC13.72□□□□□ -0.21
SGCEO43556 AL359183.1-201ENST00000623796 2132 ntBASIC13.72□□□□□ -0.21
SGCEO43556 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC13.72□□□□□ -0.21
SGCEO43556 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC13.72□□□□□ -0.21
SGCEO43556 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SGCEO43556 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
SGCEO43556 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SGCEO43556 OR2I1P-209ENST00000641730 5365 ntBASIC13.72□□□□□ -0.21
SGCEO43556 AC106881.1-201ENST00000605849 3329 ntBASIC13.72□□□□□ -0.21
SGCEO43556 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
SGCEO43556 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
SGCEO43556 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
SGCEO43556 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
SGCEO43556 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC13.72□□□□□ -0.21
SGCEO43556 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
SGCEO43556 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SGCEO43556 PNMT-202ENST00000394246 821 ntTSL 2 BASIC13.72□□□□□ -0.21
SGCEO43556 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
SGCEO43556 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC13.72□□□□□ -0.21
SGCEO43556 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC13.72□□□□□ -0.21
SGCEO43556 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC13.72□□□□□ -0.21
SGCEO43556 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
SGCEO43556 MPI-209ENST00000564003 1195 ntTSL 2 BASIC13.72□□□□□ -0.21
SGCEO43556 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC13.72□□□□□ -0.21
SGCEO43556 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC13.72□□□□□ -0.21
SGCEO43556 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
SGCEO43556 AC074044.1-201ENST00000609673 707 ntBASIC13.72□□□□□ -0.21
SGCEO43556 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC13.72□□□□□ -0.21
SGCEO43556 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
SGCEO43556 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC13.72□□□□□ -0.21
SGCEO43556 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
SGCEO43556 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SGCEO43556 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SGCEO43556 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
SGCEO43556 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SGCEO43556 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SGCEO43556 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
SGCEO43556 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
SGCEO43556 AC006058.4-201ENST00000624016 1670 ntBASIC13.72□□□□□ -0.21
SGCEO43556 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
SGCEO43556 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC13.72□□□□□ -0.21
SGCEO43556 AC100757.3-201ENST00000622361 1406 ntBASIC13.72□□□□□ -0.21
SGCEO43556 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SGCEO43556 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
SGCEO43556 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SGCEO43556 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SGCEO43556 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SGCEO43556 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
SGCEO43556 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SGCEO43556 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
SGCEO43556 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
SGCEO43556 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
SGCEO43556 AC112693.3-201ENST00000624819 1983 ntBASIC13.71□□□□□ -0.21
SGCEO43556 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SGCEO43556 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SGCEO43556 GRK6P1-201ENST00000400595 1711 ntBASIC13.71□□□□□ -0.21
SGCEO43556 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SGCEO43556 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
SGCEO43556 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SGCEO43556 VMA21-202ENST00000370361 693 ntTSL 5 BASIC13.71□□□□□ -0.21
SGCEO43556 AC074338.1-201ENST00000416825 156 ntBASIC13.71□□□□□ -0.21
SGCEO43556 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC13.71□□□□□ -0.21
SGCEO43556 AC241585.1-201ENST00000433527 519 ntBASIC13.71□□□□□ -0.21
SGCEO43556 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC13.71□□□□□ -0.21
SGCEO43556 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
SGCEO43556 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC13.71□□□□□ -0.21
SGCEO43556 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC13.71□□□□□ -0.21
SGCEO43556 DUX4L27-201ENST00000554796 1261 ntBASIC13.71□□□□□ -0.21
SGCEO43556 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC13.71□□□□□ -0.21
SGCEO43556 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC13.71□□□□□ -0.21
SGCEO43556 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC13.71□□□□□ -0.21
SGCEO43556 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC13.71□□□□□ -0.21
SGCEO43556 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
SGCEO43556 AL109936.8-201ENST00000641772 604 ntBASIC13.71□□□□□ -0.21
SGCEO43556 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SGCEO43556 STK33-217ENST00000534493 1895 ntTSL 2 BASIC13.71□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 54.8 ms