Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
SRRM4A7MD48 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
SRRM4A7MD48 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
SRRM4A7MD48 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SRRM4A7MD48 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
SRRM4A7MD48 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SRRM4A7MD48 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC12.43□□□□□ -0.42
SRRM4A7MD48 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SRRM4A7MD48 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
SRRM4A7MD48 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SRRM4A7MD48 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SRRM4A7MD48 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SRRM4A7MD48 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC12.43□□□□□ -0.42
SRRM4A7MD48 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SRRM4A7MD48 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
SRRM4A7MD48 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC12.43□□□□□ -0.42
SRRM4A7MD48 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SRRM4A7MD48 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SRRM4A7MD48 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
SRRM4A7MD48 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
SRRM4A7MD48 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
SRRM4A7MD48 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC12.43□□□□□ -0.42
SRRM4A7MD48 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
SRRM4A7MD48 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SRRM4A7MD48 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
SRRM4A7MD48 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC12.43□□□□□ -0.42
SRRM4A7MD48 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SRRM4A7MD48 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SRRM4A7MD48 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC12.43□□□□□ -0.42
SRRM4A7MD48 METTL21AP1-201ENST00000438852 635 ntBASIC12.43□□□□□ -0.42
SRRM4A7MD48 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC12.43□□□□□ -0.42
SRRM4A7MD48 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
SRRM4A7MD48 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
SRRM4A7MD48 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC12.43□□□□□ -0.42
SRRM4A7MD48 AC009407.1-201ENST00000568958 598 ntBASIC12.43□□□□□ -0.42
SRRM4A7MD48 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC12.43□□□□□ -0.42
SRRM4A7MD48 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC12.43□□□□□ -0.42
SRRM4A7MD48 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC12.43□□□□□ -0.42
SRRM4A7MD48 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC12.43□□□□□ -0.42
SRRM4A7MD48 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
SRRM4A7MD48 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SRRM4A7MD48 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC12.43□□□□□ -0.42
SRRM4A7MD48 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
SRRM4A7MD48 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
SRRM4A7MD48 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
SRRM4A7MD48 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC12.43□□□□□ -0.42
SRRM4A7MD48 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SRRM4A7MD48 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
SRRM4A7MD48 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
SRRM4A7MD48 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC12.43□□□□□ -0.42
SRRM4A7MD48 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
SRRM4A7MD48 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SRRM4A7MD48 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC12.43□□□□□ -0.42
SRRM4A7MD48 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
SRRM4A7MD48 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
SRRM4A7MD48 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC12.42□□□□□ -0.42
SRRM4A7MD48 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
SRRM4A7MD48 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
SRRM4A7MD48 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
SRRM4A7MD48 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SRRM4A7MD48 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
SRRM4A7MD48 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC12.42□□□□□ -0.42
SRRM4A7MD48 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
SRRM4A7MD48 LINC00552-201ENST00000625151 2579 ntBASIC12.42□□□□□ -0.42
SRRM4A7MD48 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC12.42□□□□□ -0.42
SRRM4A7MD48 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
SRRM4A7MD48 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SRRM4A7MD48 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
SRRM4A7MD48 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
SRRM4A7MD48 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SRRM4A7MD48 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC12.42□□□□□ -0.42
SRRM4A7MD48 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC12.42□□□□□ -0.42
SRRM4A7MD48 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SRRM4A7MD48 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC12.42□□□□□ -0.42
SRRM4A7MD48 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC12.42□□□□□ -0.42
SRRM4A7MD48 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SRRM4A7MD48 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
SRRM4A7MD48 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC12.42□□□□□ -0.42
SRRM4A7MD48 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SRRM4A7MD48 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
SRRM4A7MD48 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
SRRM4A7MD48 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SRRM4A7MD48 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC12.42□□□□□ -0.42
SRRM4A7MD48 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC12.42□□□□□ -0.42
SRRM4A7MD48 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC12.42□□□□□ -0.42
SRRM4A7MD48 AC241585.1-201ENST00000433527 519 ntBASIC12.42□□□□□ -0.42
SRRM4A7MD48 AC114501.2-201ENST00000439631 535 ntBASIC12.42□□□□□ -0.42
SRRM4A7MD48 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC12.42□□□□□ -0.42
SRRM4A7MD48 AC009477.1-201ENST00000452936 217 ntBASIC12.42□□□□□ -0.42
SRRM4A7MD48 TIMM17BP1-201ENST00000545713 516 ntBASIC12.42□□□□□ -0.42
SRRM4A7MD48 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
SRRM4A7MD48 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC12.42□□□□□ -0.42
SRRM4A7MD48 AL645728.2-202ENST00000641679 227 ntBASIC12.42□□□□□ -0.42
SRRM4A7MD48 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SRRM4A7MD48 REXO1L4P-201ENST00000605109 1937 ntBASIC12.42□□□□□ -0.42
SRRM4A7MD48 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SRRM4A7MD48 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SRRM4A7MD48 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
SRRM4A7MD48 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SRRM4A7MD48 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms