Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC66A2RUB6 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC66A2RUB6 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC16.82■□□□□ 0.28
CCDC66A2RUB6 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC66A2RUB6 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC16.82■□□□□ 0.28
CCDC66A2RUB6 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC66A2RUB6 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC66A2RUB6 API5-202ENST00000420461 2009 ntTSL 2 BASIC16.82■□□□□ 0.28
CCDC66A2RUB6 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC66A2RUB6 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC66A2RUB6 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC66A2RUB6 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC66A2RUB6 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC66A2RUB6 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC66A2RUB6 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC16.81■□□□□ 0.28
CCDC66A2RUB6 USP40-208ENST00000450966 5616 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC66A2RUB6 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
CCDC66A2RUB6 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC66A2RUB6 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC16.81■□□□□ 0.28
CCDC66A2RUB6 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
CCDC66A2RUB6 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC66A2RUB6 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
CCDC66A2RUB6 TRPV6-201ENST00000359396 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC66A2RUB6 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC66A2RUB6 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
CCDC66A2RUB6 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC16.81■□□□□ 0.28
CCDC66A2RUB6 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC66A2RUB6 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC16.81■□□□□ 0.28
CCDC66A2RUB6 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC66A2RUB6 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC16.81■□□□□ 0.28
CCDC66A2RUB6 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC66A2RUB6 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC16.81■□□□□ 0.28
CCDC66A2RUB6 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC66A2RUB6 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC16.81■□□□□ 0.28
CCDC66A2RUB6 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC66A2RUB6 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC66A2RUB6 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC16.81■□□□□ 0.28
CCDC66A2RUB6 AC007967.2-201ENST00000432613 625 ntBASIC16.81■□□□□ 0.28
CCDC66A2RUB6 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC16.81■□□□□ 0.28
CCDC66A2RUB6 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC16.81■□□□□ 0.28
CCDC66A2RUB6 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC16.81■□□□□ 0.28
CCDC66A2RUB6 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC16.81■□□□□ 0.28
CCDC66A2RUB6 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
CCDC66A2RUB6 RARRES2P8-201ENST00000566335 367 ntBASIC16.81■□□□□ 0.28
CCDC66A2RUB6 PAM16-215ENST00000577031 548 ntTSL 4 BASIC16.81■□□□□ 0.28
CCDC66A2RUB6 AC120114.3-201ENST00000611923 658 ntBASIC16.81■□□□□ 0.28
CCDC66A2RUB6 SPTSSB-204ENST00000617024 1292 ntBASIC16.81■□□□□ 0.28
CCDC66A2RUB6 HADH-212ENST00000638621 741 ntTSL 5 BASIC16.81■□□□□ 0.28
CCDC66A2RUB6 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC66A2RUB6 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC66A2RUB6 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC66A2RUB6 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC66A2RUB6 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC66A2RUB6 NFATC2-203ENST00000414705 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC66A2RUB6 FUBP1-203ENST00000370768 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC66A2RUB6 PARN-202ENST00000420015 2360 ntTSL 2 BASIC16.81■□□□□ 0.28
CCDC66A2RUB6 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC66A2RUB6 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC66A2RUB6 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC66A2RUB6 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC66A2RUB6 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC16.81■□□□□ 0.28
CCDC66A2RUB6 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC66A2RUB6 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC66A2RUB6 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC66A2RUB6 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC66A2RUB6 DOCK4-206ENST00000437633 6212 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC66A2RUB6 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC16.81■□□□□ 0.28
CCDC66A2RUB6 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC16.81■□□□□ 0.28
CCDC66A2RUB6 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC16.8■□□□□ 0.28
CCDC66A2RUB6 PCK2-216ENST00000561286 2012 ntTSL 2 BASIC16.8■□□□□ 0.28
CCDC66A2RUB6 ACP7-201ENST00000331256 2966 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
CCDC66A2RUB6 AC091951.1-201ENST00000512854 2465 ntBASIC16.8■□□□□ 0.28
CCDC66A2RUB6 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC16.8■□□□□ 0.28
CCDC66A2RUB6 CC2D1B-201ENST00000284376 3377 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
CCDC66A2RUB6 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC66A2RUB6 AL691432.1-201ENST00000596308 1422 ntBASIC16.8■□□□□ 0.28
CCDC66A2RUB6 LIMD2-201ENST00000259006 3193 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC66A2RUB6 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC66A2RUB6 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC66A2RUB6 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC66A2RUB6 BSG-215ENST00000618006 1329 ntTSL 2 BASIC16.8■□□□□ 0.28
CCDC66A2RUB6 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC66A2RUB6 AC092127.1-201ENST00000567093 3455 ntBASIC16.8■□□□□ 0.28
CCDC66A2RUB6 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC66A2RUB6 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC16.8■□□□□ 0.28
CCDC66A2RUB6 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC66A2RUB6 LBH-204ENST00000406087 559 ntTSL 4 BASIC16.8■□□□□ 0.28
CCDC66A2RUB6 HNRNPA1P28-201ENST00000424481 961 ntBASIC16.8■□□□□ 0.28
CCDC66A2RUB6 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC16.8■□□□□ 0.28
CCDC66A2RUB6 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC16.8■□□□□ 0.28
CCDC66A2RUB6 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC66A2RUB6 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC16.8■□□□□ 0.28
CCDC66A2RUB6 AC099522.2-201ENST00000607001 744 ntBASIC16.8■□□□□ 0.28
CCDC66A2RUB6 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC66A2RUB6 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC16.8■□□□□ 0.28
CCDC66A2RUB6 BX640515.1-201ENST00000617215 977 ntBASIC16.8■□□□□ 0.28
CCDC66A2RUB6 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC16.8■□□□□ 0.28
CCDC66A2RUB6 ANKRD11-203ENST00000378330 9132 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC66A2RUB6 COLGALT1-201ENST00000252599 3704 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC66A2RUB6 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms