Protein–RNA interactions for Protein: Q9Y5F0

PCDHB13, Protocadherin beta-13, humanhuman

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB13Q9Y5F0 TP73-209ENST00000603362 1668 ntTSL 5 BASIC17.17■□□□□ 0.34
PCDHB13Q9Y5F0 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC17.17■□□□□ 0.34
PCDHB13Q9Y5F0 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC17.17■□□□□ 0.34
PCDHB13Q9Y5F0 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC17.17■□□□□ 0.34
PCDHB13Q9Y5F0 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
PCDHB13Q9Y5F0 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PCDHB13Q9Y5F0 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PCDHB13Q9Y5F0 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
PCDHB13Q9Y5F0 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
PCDHB13Q9Y5F0 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
PCDHB13Q9Y5F0 AL133247.1-201ENST00000435713 646 ntTSL 3 BASIC17.17■□□□□ 0.34
PCDHB13Q9Y5F0 FAM207CP-201ENST00000443486 507 ntBASIC17.17■□□□□ 0.34
PCDHB13Q9Y5F0 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
PCDHB13Q9Y5F0 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
PCDHB13Q9Y5F0 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC17.17■□□□□ 0.34
PCDHB13Q9Y5F0 AC109466.1-206ENST00000522686 774 ntTSL 5 BASIC17.17■□□□□ 0.34
PCDHB13Q9Y5F0 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
PCDHB13Q9Y5F0 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC17.17■□□□□ 0.34
PCDHB13Q9Y5F0 HIST2H4B-201ENST00000579512 1132 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
PCDHB13Q9Y5F0 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
PCDHB13Q9Y5F0 AL391069.4-201ENST00000609583 481 ntBASIC17.17■□□□□ 0.34
PCDHB13Q9Y5F0 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
PCDHB13Q9Y5F0 AC069503.1-202ENST00000616576 642 ntBASIC17.17■□□□□ 0.34
PCDHB13Q9Y5F0 AL158212.4-201ENST00000624062 1286 ntBASIC17.17■□□□□ 0.34
PCDHB13Q9Y5F0 AC006387.1-201ENST00000626365 671 ntTSL 5 BASIC17.17■□□□□ 0.34
PCDHB13Q9Y5F0 LINC01108-202ENST00000635227 776 ntTSL 3 BASIC17.17■□□□□ 0.34
PCDHB13Q9Y5F0 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC17.17■□□□□ 0.34
PCDHB13Q9Y5F0 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC17.17■□□□□ 0.34
PCDHB13Q9Y5F0 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PCDHB13Q9Y5F0 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PCDHB13Q9Y5F0 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PCDHB13Q9Y5F0 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC17.17■□□□□ 0.34
PCDHB13Q9Y5F0 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PCDHB13Q9Y5F0 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PCDHB13Q9Y5F0 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC17.17■□□□□ 0.34
PCDHB13Q9Y5F0 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC17.16■□□□□ 0.34
PCDHB13Q9Y5F0 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PCDHB13Q9Y5F0 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
PCDHB13Q9Y5F0 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC17.16■□□□□ 0.34
PCDHB13Q9Y5F0 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC17.16■□□□□ 0.34
PCDHB13Q9Y5F0 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PCDHB13Q9Y5F0 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC17.16■□□□□ 0.34
PCDHB13Q9Y5F0 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
PCDHB13Q9Y5F0 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC17.16■□□□□ 0.34
PCDHB13Q9Y5F0 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
PCDHB13Q9Y5F0 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PCDHB13Q9Y5F0 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PCDHB13Q9Y5F0 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC17.16■□□□□ 0.34
PCDHB13Q9Y5F0 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC17.16■□□□□ 0.34
PCDHB13Q9Y5F0 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PCDHB13Q9Y5F0 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
PCDHB13Q9Y5F0 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PCDHB13Q9Y5F0 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
PCDHB13Q9Y5F0 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PCDHB13Q9Y5F0 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
PCDHB13Q9Y5F0 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PCDHB13Q9Y5F0 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
PCDHB13Q9Y5F0 OSM-203ENST00000403463 464 ntTSL 3 BASIC17.16■□□□□ 0.34
PCDHB13Q9Y5F0 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PCDHB13Q9Y5F0 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC17.16■□□□□ 0.34
PCDHB13Q9Y5F0 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC17.16■□□□□ 0.34
PCDHB13Q9Y5F0 ZRANB2-AS1-201ENST00000426999 607 ntTSL 3 BASIC17.16■□□□□ 0.34
PCDHB13Q9Y5F0 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC17.16■□□□□ 0.34
PCDHB13Q9Y5F0 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC17.16■□□□□ 0.34
PCDHB13Q9Y5F0 TMPRSS11CP-201ENST00000453277 683 ntBASIC17.16■□□□□ 0.34
PCDHB13Q9Y5F0 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC17.16■□□□□ 0.34
PCDHB13Q9Y5F0 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC17.16■□□□□ 0.34
PCDHB13Q9Y5F0 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC17.16■□□□□ 0.34
PCDHB13Q9Y5F0 AC023310.3-201ENST00000557027 670 ntBASIC17.16■□□□□ 0.34
PCDHB13Q9Y5F0 AC100756.1-201ENST00000562736 682 ntBASIC17.16■□□□□ 0.34
PCDHB13Q9Y5F0 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC17.16■□□□□ 0.34
PCDHB13Q9Y5F0 AC138749.3-201ENST00000567691 622 ntBASIC17.16■□□□□ 0.34
PCDHB13Q9Y5F0 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC17.16■□□□□ 0.34
PCDHB13Q9Y5F0 AP001793.2-201ENST00000580267 780 ntTSL 2 BASIC17.16■□□□□ 0.34
PCDHB13Q9Y5F0 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC17.16■□□□□ 0.34
PCDHB13Q9Y5F0 AC116165.1-201ENST00000611806 668 ntBASIC17.16■□□□□ 0.34
PCDHB13Q9Y5F0 HFE2-206ENST00000634927 506 ntTSL 4 BASIC17.16■□□□□ 0.34
PCDHB13Q9Y5F0 AL590396.2-201ENST00000636511 1041 ntBASIC17.16■□□□□ 0.34
PCDHB13Q9Y5F0 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC17.16■□□□□ 0.34
PCDHB13Q9Y5F0 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PCDHB13Q9Y5F0 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PCDHB13Q9Y5F0 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PCDHB13Q9Y5F0 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
PCDHB13Q9Y5F0 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC17.16■□□□□ 0.34
PCDHB13Q9Y5F0 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PCDHB13Q9Y5F0 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
PCDHB13Q9Y5F0 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC17.16■□□□□ 0.34
PCDHB13Q9Y5F0 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
PCDHB13Q9Y5F0 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PCDHB13Q9Y5F0 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PCDHB13Q9Y5F0 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PCDHB13Q9Y5F0 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PCDHB13Q9Y5F0 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC17.16■□□□□ 0.34
PCDHB13Q9Y5F0 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PCDHB13Q9Y5F0 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC17.16■□□□□ 0.34
PCDHB13Q9Y5F0 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC17.16■□□□□ 0.34
PCDHB13Q9Y5F0 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC17.15■□□□□ 0.34
PCDHB13Q9Y5F0 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC17.15■□□□□ 0.34
PCDHB13Q9Y5F0 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PCDHB13Q9Y5F0 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC17.15■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 81.5 ms