Protein–RNA interactions for Protein: Q9Y4B5

MTCL1, Microtubule cross-linking factor 1, humanhuman

Known RBP Predictions only

Length 1,905 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTCL1Q9Y4B5 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
MTCL1Q9Y4B5 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
MTCL1Q9Y4B5 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
MTCL1Q9Y4B5 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
MTCL1Q9Y4B5 TMEM256-201ENST00000302422 486 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
MTCL1Q9Y4B5 RPS16-202ENST00000339471 643 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
MTCL1Q9Y4B5 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC15.71■□□□□ 0.11
MTCL1Q9Y4B5 AL157407.1-201ENST00000435784 904 ntBASIC15.71■□□□□ 0.11
MTCL1Q9Y4B5 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC15.71■□□□□ 0.11
MTCL1Q9Y4B5 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC15.71■□□□□ 0.11
MTCL1Q9Y4B5 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
MTCL1Q9Y4B5 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC15.71■□□□□ 0.11
MTCL1Q9Y4B5 SIRT2-219ENST00000613542 1170 ntTSL 5 BASIC15.71■□□□□ 0.11
MTCL1Q9Y4B5 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC15.71■□□□□ 0.11
MTCL1Q9Y4B5 AC004923.1-202ENST00000642106 209 ntBASIC15.71■□□□□ 0.11
MTCL1Q9Y4B5 SHOX-202ENST00000381575 1351 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
MTCL1Q9Y4B5 AC003102.2-201ENST00000589195 1469 ntBASIC15.71■□□□□ 0.11
MTCL1Q9Y4B5 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
MTCL1Q9Y4B5 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
MTCL1Q9Y4B5 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC15.71■□□□□ 0.11
MTCL1Q9Y4B5 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC15.71■□□□□ 0.11
MTCL1Q9Y4B5 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
MTCL1Q9Y4B5 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC15.71■□□□□ 0.11
MTCL1Q9Y4B5 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
MTCL1Q9Y4B5 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
MTCL1Q9Y4B5 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC15.71■□□□□ 0.1
MTCL1Q9Y4B5 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC15.71■□□□□ 0.1
MTCL1Q9Y4B5 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
MTCL1Q9Y4B5 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
MTCL1Q9Y4B5 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
MTCL1Q9Y4B5 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC15.7■□□□□ 0.1
MTCL1Q9Y4B5 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
MTCL1Q9Y4B5 AC091046.1-201ENST00000331871 207 ntBASIC15.7■□□□□ 0.1
MTCL1Q9Y4B5 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC15.7■□□□□ 0.1
MTCL1Q9Y4B5 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
MTCL1Q9Y4B5 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
MTCL1Q9Y4B5 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC15.7■□□□□ 0.1
MTCL1Q9Y4B5 AL596276.2-201ENST00000447525 331 ntBASIC15.7■□□□□ 0.1
MTCL1Q9Y4B5 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC15.7■□□□□ 0.1
MTCL1Q9Y4B5 PRKRA-211ENST00000487082 1211 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
MTCL1Q9Y4B5 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC15.7■□□□□ 0.1
MTCL1Q9Y4B5 AC008443.1-201ENST00000511331 1000 ntTSL 3 BASIC15.7■□□□□ 0.1
MTCL1Q9Y4B5 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC15.7■□□□□ 0.1
MTCL1Q9Y4B5 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC15.7■□□□□ 0.1
MTCL1Q9Y4B5 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
MTCL1Q9Y4B5 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
MTCL1Q9Y4B5 AL139384.1-201ENST00000612143 3047 ntBASIC15.7■□□□□ 0.1
MTCL1Q9Y4B5 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC15.7■□□□□ 0.1
MTCL1Q9Y4B5 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
MTCL1Q9Y4B5 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC15.7■□□□□ 0.1
MTCL1Q9Y4B5 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC15.7■□□□□ 0.1
MTCL1Q9Y4B5 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
MTCL1Q9Y4B5 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
MTCL1Q9Y4B5 MBLAC2-202ENST00000514906 1936 ntBASIC15.7■□□□□ 0.1
MTCL1Q9Y4B5 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
MTCL1Q9Y4B5 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC15.7■□□□□ 0.1
MTCL1Q9Y4B5 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
MTCL1Q9Y4B5 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
MTCL1Q9Y4B5 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
MTCL1Q9Y4B5 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
MTCL1Q9Y4B5 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC15.7■□□□□ 0.1
MTCL1Q9Y4B5 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC15.7■□□□□ 0.1
MTCL1Q9Y4B5 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
MTCL1Q9Y4B5 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
MTCL1Q9Y4B5 AWAT1-201ENST00000374521 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
MTCL1Q9Y4B5 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
MTCL1Q9Y4B5 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
MTCL1Q9Y4B5 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
MTCL1Q9Y4B5 DPCD-202ENST00000370151 858 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
MTCL1Q9Y4B5 ARL16-201ENST00000397498 1227 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
MTCL1Q9Y4B5 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC15.7■□□□□ 0.1
MTCL1Q9Y4B5 AC253536.4-201ENST00000440539 267 ntBASIC15.7■□□□□ 0.1
MTCL1Q9Y4B5 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
MTCL1Q9Y4B5 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC15.7■□□□□ 0.1
MTCL1Q9Y4B5 ARL16-214ENST00000621051 1181 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
MTCL1Q9Y4B5 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC15.7■□□□□ 0.1
MTCL1Q9Y4B5 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC15.7■□□□□ 0.1
MTCL1Q9Y4B5 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC15.7■□□□□ 0.1
MTCL1Q9Y4B5 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
MTCL1Q9Y4B5 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC15.7■□□□□ 0.1
MTCL1Q9Y4B5 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC15.7■□□□□ 0.1
MTCL1Q9Y4B5 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC15.7■□□□□ 0.1
MTCL1Q9Y4B5 AL157791.1-201ENST00000553667 1699 ntBASIC15.69■□□□□ 0.1
MTCL1Q9Y4B5 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
MTCL1Q9Y4B5 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
MTCL1Q9Y4B5 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC15.69■□□□□ 0.1
MTCL1Q9Y4B5 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
MTCL1Q9Y4B5 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
MTCL1Q9Y4B5 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
MTCL1Q9Y4B5 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
MTCL1Q9Y4B5 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC15.69■□□□□ 0.1
MTCL1Q9Y4B5 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
MTCL1Q9Y4B5 E2F3P2-201ENST00000447755 1422 ntBASIC15.69■□□□□ 0.1
MTCL1Q9Y4B5 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
MTCL1Q9Y4B5 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
MTCL1Q9Y4B5 KRT8P29-201ENST00000420409 1371 ntBASIC15.69■□□□□ 0.1
MTCL1Q9Y4B5 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
MTCL1Q9Y4B5 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
MTCL1Q9Y4B5 AC020910.5-201ENST00000623668 1865 ntBASIC15.69■□□□□ 0.1
MTCL1Q9Y4B5 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC15.69■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms