Protein–RNA interactions for Protein: Q9Y282

ERGIC3, Endoplasmic reticulum-Golgi intermediate compartment protein 3, humanhuman

Predictions only

Length 383 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3Q9Y282 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ERGIC3Q9Y282 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
ERGIC3Q9Y282 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC14.15□□□□□ -0.14
ERGIC3Q9Y282 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC14.15□□□□□ -0.14
ERGIC3Q9Y282 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
ERGIC3Q9Y282 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ERGIC3Q9Y282 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ERGIC3Q9Y282 POM121-201ENST00000358357 5320 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
ERGIC3Q9Y282 FAM219A-201ENST00000297620 3588 ntAPPRIS P3 TSL 2 BASIC14.15□□□□□ -0.14
ERGIC3Q9Y282 INVS-201ENST00000262456 2968 ntTSL 5 BASIC14.15□□□□□ -0.14
ERGIC3Q9Y282 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
ERGIC3Q9Y282 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
ERGIC3Q9Y282 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
ERGIC3Q9Y282 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
ERGIC3Q9Y282 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC14.15□□□□□ -0.14
ERGIC3Q9Y282 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC14.15□□□□□ -0.14
ERGIC3Q9Y282 OR7E14P-202ENST00000530490 1290 ntBASIC14.15□□□□□ -0.14
ERGIC3Q9Y282 TPM1-218ENST00000559281 851 ntTSL 5 BASIC14.15□□□□□ -0.14
ERGIC3Q9Y282 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.14
ERGIC3Q9Y282 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
ERGIC3Q9Y282 PAM16-215ENST00000577031 548 ntTSL 4 BASIC14.15□□□□□ -0.14
ERGIC3Q9Y282 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC14.15□□□□□ -0.14
ERGIC3Q9Y282 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC14.15□□□□□ -0.14
ERGIC3Q9Y282 BCAR1-208ENST00000542031 2846 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
ERGIC3Q9Y282 MKNK1-203ENST00000371945 2618 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
ERGIC3Q9Y282 LSS-211ENST00000522411 2523 ntTSL 2 BASIC14.15□□□□□ -0.14
ERGIC3Q9Y282 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
ERGIC3Q9Y282 RGS9-210ENST00000635833 2308 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
ERGIC3Q9Y282 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC14.15□□□□□ -0.14
ERGIC3Q9Y282 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
ERGIC3Q9Y282 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC14.15□□□□□ -0.14
ERGIC3Q9Y282 FAAP100-202ENST00000425898 2996 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
ERGIC3Q9Y282 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ERGIC3Q9Y282 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
ERGIC3Q9Y282 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC14.15□□□□□ -0.14
ERGIC3Q9Y282 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ERGIC3Q9Y282 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC14.15□□□□□ -0.14
ERGIC3Q9Y282 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC14.15□□□□□ -0.14
ERGIC3Q9Y282 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC14.15□□□□□ -0.15
ERGIC3Q9Y282 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ERGIC3Q9Y282 MYLK-208ENST00000475616 5745 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
ERGIC3Q9Y282 IL13RA1-202ENST00000371666 4036 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ERGIC3Q9Y282 CHFR-205ENST00000450056 3250 ntTSL 2 BASIC14.14□□□□□ -0.15
ERGIC3Q9Y282 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ERGIC3Q9Y282 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
ERGIC3Q9Y282 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
ERGIC3Q9Y282 USP35-204ENST00000530267 2419 ntTSL 2 BASIC14.14□□□□□ -0.15
ERGIC3Q9Y282 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
ERGIC3Q9Y282 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC14.14□□□□□ -0.15
ERGIC3Q9Y282 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC14.14□□□□□ -0.15
ERGIC3Q9Y282 AL512306.2-201ENST00000444037 2219 ntTSL 2 BASIC14.14□□□□□ -0.15
ERGIC3Q9Y282 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
ERGIC3Q9Y282 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
ERGIC3Q9Y282 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
ERGIC3Q9Y282 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
ERGIC3Q9Y282 CDHR5-203ENST00000397542 3489 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
ERGIC3Q9Y282 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ERGIC3Q9Y282 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
ERGIC3Q9Y282 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
ERGIC3Q9Y282 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
ERGIC3Q9Y282 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC14.14□□□□□ -0.15
ERGIC3Q9Y282 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC14.14□□□□□ -0.15
ERGIC3Q9Y282 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC14.14□□□□□ -0.15
ERGIC3Q9Y282 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC14.14□□□□□ -0.15
ERGIC3Q9Y282 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC14.14□□□□□ -0.15
ERGIC3Q9Y282 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC14.14□□□□□ -0.15
ERGIC3Q9Y282 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC14.14□□□□□ -0.15
ERGIC3Q9Y282 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
ERGIC3Q9Y282 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
ERGIC3Q9Y282 AC004790.2-201ENST00000623588 572 ntBASIC14.14□□□□□ -0.15
ERGIC3Q9Y282 AC005593.1-201ENST00000624894 515 ntBASIC14.14□□□□□ -0.15
ERGIC3Q9Y282 MST1P2-201ENST00000457982 2291 ntBASIC14.14□□□□□ -0.15
ERGIC3Q9Y282 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ERGIC3Q9Y282 FFAR4-201ENST00000371481 3605 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ERGIC3Q9Y282 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ERGIC3Q9Y282 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
ERGIC3Q9Y282 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC14.14□□□□□ -0.15
ERGIC3Q9Y282 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
ERGIC3Q9Y282 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
ERGIC3Q9Y282 ARMCX2-201ENST00000328766 2762 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ERGIC3Q9Y282 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ERGIC3Q9Y282 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
ERGIC3Q9Y282 MAP7-204ENST00000454590 3119 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
ERGIC3Q9Y282 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
ERGIC3Q9Y282 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC14.14□□□□□ -0.15
ERGIC3Q9Y282 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
ERGIC3Q9Y282 FIG4-201ENST00000230124 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ERGIC3Q9Y282 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
ERGIC3Q9Y282 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ERGIC3Q9Y282 CTBP1-AS2-206ENST00000581398 5652 ntBASIC14.14□□□□□ -0.15
ERGIC3Q9Y282 ARHGAP10-201ENST00000336498 3299 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ERGIC3Q9Y282 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC14.14□□□□□ -0.15
ERGIC3Q9Y282 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC14.14□□□□□ -0.15
ERGIC3Q9Y282 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
ERGIC3Q9Y282 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ERGIC3Q9Y282 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
ERGIC3Q9Y282 C15orf41-208ENST00000566621 2866 ntAPPRIS P3 TSL 5 BASIC14.13□□□□□ -0.15
ERGIC3Q9Y282 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ERGIC3Q9Y282 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
ERGIC3Q9Y282 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 59.4 ms