Protein–RNA interactions for Protein: Q9NRR3

CDC42SE2, CDC42 small effector protein 2, humanhuman

Predictions only

Length 84 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2Q9NRR3 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC10.66□□□□□ -0.7
CDC42SE2Q9NRR3 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
CDC42SE2Q9NRR3 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
CDC42SE2Q9NRR3 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC10.66□□□□□ -0.7
CDC42SE2Q9NRR3 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
CDC42SE2Q9NRR3 AC012508.2-201ENST00000567613 1472 ntBASIC10.66□□□□□ -0.7
CDC42SE2Q9NRR3 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC10.66□□□□□ -0.7
CDC42SE2Q9NRR3 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
CDC42SE2Q9NRR3 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC10.66□□□□□ -0.7
CDC42SE2Q9NRR3 MFF-204ENST00000353339 2186 ntTSL 5 BASIC10.66□□□□□ -0.7
CDC42SE2Q9NRR3 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
CDC42SE2Q9NRR3 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC10.66□□□□□ -0.7
CDC42SE2Q9NRR3 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC10.66□□□□□ -0.7
CDC42SE2Q9NRR3 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC10.66□□□□□ -0.7
CDC42SE2Q9NRR3 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
CDC42SE2Q9NRR3 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
CDC42SE2Q9NRR3 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC10.66□□□□□ -0.7
CDC42SE2Q9NRR3 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
CDC42SE2Q9NRR3 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
CDC42SE2Q9NRR3 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC10.66□□□□□ -0.7
CDC42SE2Q9NRR3 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC10.65□□□□□ -0.7
CDC42SE2Q9NRR3 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
CDC42SE2Q9NRR3 KRT8P12-202ENST00000472924 1397 ntBASIC10.65□□□□□ -0.7
CDC42SE2Q9NRR3 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
CDC42SE2Q9NRR3 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC10.65□□□□□ -0.7
CDC42SE2Q9NRR3 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
CDC42SE2Q9NRR3 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
CDC42SE2Q9NRR3 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC10.65□□□□□ -0.7
CDC42SE2Q9NRR3 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
CDC42SE2Q9NRR3 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
CDC42SE2Q9NRR3 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC10.65□□□□□ -0.7
CDC42SE2Q9NRR3 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
CDC42SE2Q9NRR3 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC10.65□□□□□ -0.7
CDC42SE2Q9NRR3 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC10.65□□□□□ -0.7
CDC42SE2Q9NRR3 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
CDC42SE2Q9NRR3 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
CDC42SE2Q9NRR3 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC10.65□□□□□ -0.7
CDC42SE2Q9NRR3 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
CDC42SE2Q9NRR3 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
CDC42SE2Q9NRR3 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
CDC42SE2Q9NRR3 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC10.65□□□□□ -0.7
CDC42SE2Q9NRR3 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
CDC42SE2Q9NRR3 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC10.65□□□□□ -0.7
CDC42SE2Q9NRR3 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
CDC42SE2Q9NRR3 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
CDC42SE2Q9NRR3 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
CDC42SE2Q9NRR3 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC10.65□□□□□ -0.7
CDC42SE2Q9NRR3 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
CDC42SE2Q9NRR3 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC10.65□□□□□ -0.7
CDC42SE2Q9NRR3 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
CDC42SE2Q9NRR3 USP40-206ENST00000443711 628 ntTSL 2 BASIC10.65□□□□□ -0.7
CDC42SE2Q9NRR3 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
CDC42SE2Q9NRR3 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC10.65□□□□□ -0.7
CDC42SE2Q9NRR3 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC10.65□□□□□ -0.7
CDC42SE2Q9NRR3 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC10.65□□□□□ -0.7
CDC42SE2Q9NRR3 TSFM-210ENST00000550559 897 ntTSL 5 BASIC10.65□□□□□ -0.7
CDC42SE2Q9NRR3 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC10.65□□□□□ -0.7
CDC42SE2Q9NRR3 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC10.65□□□□□ -0.7
CDC42SE2Q9NRR3 AC015910.1-201ENST00000579400 975 ntBASIC10.65□□□□□ -0.7
CDC42SE2Q9NRR3 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC10.65□□□□□ -0.7
CDC42SE2Q9NRR3 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
CDC42SE2Q9NRR3 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC10.65□□□□□ -0.7
CDC42SE2Q9NRR3 AC120114.3-201ENST00000611923 658 ntBASIC10.65□□□□□ -0.7
CDC42SE2Q9NRR3 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC10.65□□□□□ -0.7
CDC42SE2Q9NRR3 SERF2-217ENST00000630046 862 ntTSL 5 BASIC10.65□□□□□ -0.7
CDC42SE2Q9NRR3 AL645728.2-202ENST00000641679 227 ntBASIC10.65□□□□□ -0.7
CDC42SE2Q9NRR3 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC10.65□□□□□ -0.7
CDC42SE2Q9NRR3 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
CDC42SE2Q9NRR3 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
CDC42SE2Q9NRR3 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
CDC42SE2Q9NRR3 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
CDC42SE2Q9NRR3 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
CDC42SE2Q9NRR3 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
CDC42SE2Q9NRR3 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC10.65□□□□□ -0.7
CDC42SE2Q9NRR3 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC10.65□□□□□ -0.7
CDC42SE2Q9NRR3 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC10.65□□□□□ -0.7
CDC42SE2Q9NRR3 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
CDC42SE2Q9NRR3 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
CDC42SE2Q9NRR3 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.71
CDC42SE2Q9NRR3 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC10.65□□□□□ -0.71
CDC42SE2Q9NRR3 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
CDC42SE2Q9NRR3 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC10.65□□□□□ -0.71
CDC42SE2Q9NRR3 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC10.65□□□□□ -0.71
CDC42SE2Q9NRR3 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC10.65□□□□□ -0.71
CDC42SE2Q9NRR3 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC10.65□□□□□ -0.71
CDC42SE2Q9NRR3 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC10.65□□□□□ -0.71
CDC42SE2Q9NRR3 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC10.65□□□□□ -0.71
CDC42SE2Q9NRR3 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC10.65□□□□□ -0.71
CDC42SE2Q9NRR3 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
CDC42SE2Q9NRR3 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
CDC42SE2Q9NRR3 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC10.64□□□□□ -0.71
CDC42SE2Q9NRR3 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
CDC42SE2Q9NRR3 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
CDC42SE2Q9NRR3 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
CDC42SE2Q9NRR3 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC10.64□□□□□ -0.71
CDC42SE2Q9NRR3 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
CDC42SE2Q9NRR3 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
CDC42SE2Q9NRR3 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC10.64□□□□□ -0.71
CDC42SE2Q9NRR3 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
CDC42SE2Q9NRR3 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms