Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 HARS-202ENST00000415192 1401 ntTSL 2 BASIC13.6□□□□□ -0.23
KIAA1549Q9HCM3 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
KIAA1549Q9HCM3 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC13.6□□□□□ -0.23
KIAA1549Q9HCM3 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
KIAA1549Q9HCM3 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
KIAA1549Q9HCM3 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
KIAA1549Q9HCM3 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
KIAA1549Q9HCM3 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC13.6□□□□□ -0.23
KIAA1549Q9HCM3 APOC3-202ENST00000375345 604 ntTSL 5 BASIC13.6□□□□□ -0.23
KIAA1549Q9HCM3 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
KIAA1549Q9HCM3 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC13.6□□□□□ -0.23
KIAA1549Q9HCM3 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC13.6□□□□□ -0.23
KIAA1549Q9HCM3 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC13.6□□□□□ -0.23
KIAA1549Q9HCM3 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
KIAA1549Q9HCM3 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC13.6□□□□□ -0.23
KIAA1549Q9HCM3 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
KIAA1549Q9HCM3 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC13.6□□□□□ -0.23
KIAA1549Q9HCM3 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC13.6□□□□□ -0.23
KIAA1549Q9HCM3 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC13.6□□□□□ -0.23
KIAA1549Q9HCM3 RN7SL219P-201ENST00000582872 296 ntBASIC13.6□□□□□ -0.23
KIAA1549Q9HCM3 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
KIAA1549Q9HCM3 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC13.6□□□□□ -0.23
KIAA1549Q9HCM3 AP005019.2-201ENST00000615104 511 ntBASIC13.6□□□□□ -0.23
KIAA1549Q9HCM3 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
KIAA1549Q9HCM3 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC13.6□□□□□ -0.23
KIAA1549Q9HCM3 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC13.6□□□□□ -0.23
KIAA1549Q9HCM3 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
KIAA1549Q9HCM3 ZBTB45P1-201ENST00000452761 1456 ntBASIC13.59□□□□□ -0.23
KIAA1549Q9HCM3 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
KIAA1549Q9HCM3 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
KIAA1549Q9HCM3 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC13.59□□□□□ -0.23
KIAA1549Q9HCM3 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC13.59□□□□□ -0.23
KIAA1549Q9HCM3 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
KIAA1549Q9HCM3 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
KIAA1549Q9HCM3 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC13.59□□□□□ -0.23
KIAA1549Q9HCM3 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
KIAA1549Q9HCM3 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
KIAA1549Q9HCM3 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
KIAA1549Q9HCM3 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
KIAA1549Q9HCM3 AL354989.2-201ENST00000435838 1540 ntBASIC13.59□□□□□ -0.23
KIAA1549Q9HCM3 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC13.59□□□□□ -0.23
KIAA1549Q9HCM3 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC13.59□□□□□ -0.23
KIAA1549Q9HCM3 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC13.59□□□□□ -0.23
KIAA1549Q9HCM3 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC13.59□□□□□ -0.23
KIAA1549Q9HCM3 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
KIAA1549Q9HCM3 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
KIAA1549Q9HCM3 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
KIAA1549Q9HCM3 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC13.59□□□□□ -0.23
KIAA1549Q9HCM3 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
KIAA1549Q9HCM3 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
KIAA1549Q9HCM3 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
KIAA1549Q9HCM3 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC13.59□□□□□ -0.23
KIAA1549Q9HCM3 ACKR1-201ENST00000368121 1240 ntBASIC13.59□□□□□ -0.23
KIAA1549Q9HCM3 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
KIAA1549Q9HCM3 ACTBP11-201ENST00000436287 1126 ntBASIC13.59□□□□□ -0.23
KIAA1549Q9HCM3 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC13.59□□□□□ -0.23
KIAA1549Q9HCM3 PFN2-215ENST00000497148 743 ntTSL 4 BASIC13.59□□□□□ -0.23
KIAA1549Q9HCM3 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC13.59□□□□□ -0.23
KIAA1549Q9HCM3 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC13.59□□□□□ -0.23
KIAA1549Q9HCM3 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC13.59□□□□□ -0.23
KIAA1549Q9HCM3 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC13.59□□□□□ -0.23
KIAA1549Q9HCM3 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC13.59□□□□□ -0.23
KIAA1549Q9HCM3 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC13.59□□□□□ -0.23
KIAA1549Q9HCM3 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
KIAA1549Q9HCM3 PARN-202ENST00000420015 2360 ntTSL 2 BASIC13.59□□□□□ -0.23
KIAA1549Q9HCM3 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
KIAA1549Q9HCM3 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
KIAA1549Q9HCM3 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC13.59□□□□□ -0.23
KIAA1549Q9HCM3 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
KIAA1549Q9HCM3 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC13.59□□□□□ -0.23
KIAA1549Q9HCM3 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
KIAA1549Q9HCM3 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
KIAA1549Q9HCM3 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
KIAA1549Q9HCM3 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
KIAA1549Q9HCM3 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
KIAA1549Q9HCM3 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
KIAA1549Q9HCM3 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
KIAA1549Q9HCM3 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC13.58□□□□□ -0.23
KIAA1549Q9HCM3 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
KIAA1549Q9HCM3 AC023090.2-201ENST00000625182 2110 ntBASIC13.58□□□□□ -0.23
KIAA1549Q9HCM3 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
KIAA1549Q9HCM3 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC13.58□□□□□ -0.23
KIAA1549Q9HCM3 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.23
KIAA1549Q9HCM3 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
KIAA1549Q9HCM3 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
KIAA1549Q9HCM3 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC13.58□□□□□ -0.24
KIAA1549Q9HCM3 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC13.58□□□□□ -0.24
KIAA1549Q9HCM3 FAM86HP-204ENST00000513466 959 ntBASIC13.58□□□□□ -0.24
KIAA1549Q9HCM3 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
KIAA1549Q9HCM3 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC13.58□□□□□ -0.24
KIAA1549Q9HCM3 EMC4-209ENST00000559421 497 ntTSL 2 BASIC13.58□□□□□ -0.24
KIAA1549Q9HCM3 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
KIAA1549Q9HCM3 AC243960.2-201ENST00000600996 747 ntBASIC13.58□□□□□ -0.24
KIAA1549Q9HCM3 PRKN-211ENST00000615065 261 ntTSL 5 BASIC13.58□□□□□ -0.24
KIAA1549Q9HCM3 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC13.58□□□□□ -0.24
KIAA1549Q9HCM3 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC13.58□□□□□ -0.24
KIAA1549Q9HCM3 AC012508.2-201ENST00000567613 1472 ntBASIC13.58□□□□□ -0.24
KIAA1549Q9HCM3 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.24
KIAA1549Q9HCM3 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
KIAA1549Q9HCM3 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 71.5 ms