Protein–RNA interactions for Protein: Q9HC52

CBX8, Chromobox protein homolog 8, humanhuman

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX8Q9HC52 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
CBX8Q9HC52 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CBX8Q9HC52 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CBX8Q9HC52 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
CBX8Q9HC52 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC17.24■□□□□ 0.35
CBX8Q9HC52 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC17.24■□□□□ 0.35
CBX8Q9HC52 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC17.24■□□□□ 0.35
CBX8Q9HC52 AC079140.1-201ENST00000508039 487 ntBASIC17.24■□□□□ 0.35
CBX8Q9HC52 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC17.24■□□□□ 0.35
CBX8Q9HC52 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
CBX8Q9HC52 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC17.24■□□□□ 0.35
CBX8Q9HC52 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC17.24■□□□□ 0.35
CBX8Q9HC52 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
CBX8Q9HC52 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
CBX8Q9HC52 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC17.24■□□□□ 0.35
CBX8Q9HC52 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CBX8Q9HC52 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC17.24■□□□□ 0.35
CBX8Q9HC52 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CBX8Q9HC52 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC17.24■□□□□ 0.35
CBX8Q9HC52 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CBX8Q9HC52 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC17.24■□□□□ 0.35
CBX8Q9HC52 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CBX8Q9HC52 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC17.24■□□□□ 0.35
CBX8Q9HC52 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CBX8Q9HC52 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
CBX8Q9HC52 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CBX8Q9HC52 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CBX8Q9HC52 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CBX8Q9HC52 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC17.23■□□□□ 0.35
CBX8Q9HC52 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CBX8Q9HC52 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CBX8Q9HC52 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CBX8Q9HC52 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CBX8Q9HC52 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CBX8Q9HC52 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
CBX8Q9HC52 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CBX8Q9HC52 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CBX8Q9HC52 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC17.23■□□□□ 0.35
CBX8Q9HC52 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CBX8Q9HC52 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC17.23■□□□□ 0.35
CBX8Q9HC52 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
CBX8Q9HC52 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CBX8Q9HC52 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC17.23■□□□□ 0.35
CBX8Q9HC52 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CBX8Q9HC52 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC17.23■□□□□ 0.35
CBX8Q9HC52 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC17.23■□□□□ 0.35
CBX8Q9HC52 HNRNPA1P28-201ENST00000424481 961 ntBASIC17.23■□□□□ 0.35
CBX8Q9HC52 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC17.23■□□□□ 0.35
CBX8Q9HC52 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC17.23■□□□□ 0.35
CBX8Q9HC52 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC17.23■□□□□ 0.35
CBX8Q9HC52 SLC25A39P2-201ENST00000537614 270 ntBASIC17.23■□□□□ 0.35
CBX8Q9HC52 AL662844.1-201ENST00000546340 181 ntBASIC17.23■□□□□ 0.35
CBX8Q9HC52 RARRES2P9-201ENST00000565168 469 ntBASIC17.23■□□□□ 0.35
CBX8Q9HC52 AL121894.2-201ENST00000602977 491 ntBASIC17.23■□□□□ 0.35
CBX8Q9HC52 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC17.23■□□□□ 0.35
CBX8Q9HC52 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CBX8Q9HC52 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CBX8Q9HC52 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CBX8Q9HC52 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC17.23■□□□□ 0.35
CBX8Q9HC52 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
CBX8Q9HC52 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC17.23■□□□□ 0.35
CBX8Q9HC52 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CBX8Q9HC52 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
CBX8Q9HC52 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
CBX8Q9HC52 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CBX8Q9HC52 MBLAC2-202ENST00000514906 1936 ntBASIC17.23■□□□□ 0.35
CBX8Q9HC52 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC17.23■□□□□ 0.35
CBX8Q9HC52 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CBX8Q9HC52 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
CBX8Q9HC52 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
CBX8Q9HC52 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
CBX8Q9HC52 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CBX8Q9HC52 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CBX8Q9HC52 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC17.23■□□□□ 0.35
CBX8Q9HC52 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
CBX8Q9HC52 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC17.22■□□□□ 0.35
CBX8Q9HC52 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC17.22■□□□□ 0.35
CBX8Q9HC52 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CBX8Q9HC52 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CBX8Q9HC52 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CBX8Q9HC52 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC17.22■□□□□ 0.35
CBX8Q9HC52 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CBX8Q9HC52 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CBX8Q9HC52 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC17.22■□□□□ 0.35
CBX8Q9HC52 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CBX8Q9HC52 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CBX8Q9HC52 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CBX8Q9HC52 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CBX8Q9HC52 SYS1-203ENST00000414310 795 ntTSL 3 BASIC17.22■□□□□ 0.35
CBX8Q9HC52 AC074338.1-201ENST00000416825 156 ntBASIC17.22■□□□□ 0.35
CBX8Q9HC52 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC17.22■□□□□ 0.35
CBX8Q9HC52 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC17.22■□□□□ 0.35
CBX8Q9HC52 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC17.22■□□□□ 0.35
CBX8Q9HC52 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CBX8Q9HC52 KRT8P23-201ENST00000560090 1207 ntBASIC17.22■□□□□ 0.35
CBX8Q9HC52 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CBX8Q9HC52 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC17.22■□□□□ 0.35
CBX8Q9HC52 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CBX8Q9HC52 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CBX8Q9HC52 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms