Protein–RNA interactions for Protein: Q9C002

NMES1, Normal mucosa of esophagus-specific gene 1 protein, humanhuman

Predictions only

Length 83 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NMES1Q9C002 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC12.73□□□□□ -0.37
NMES1Q9C002 IRF8-202ENST00000562492 946 ntTSL 3 BASIC12.73□□□□□ -0.37
NMES1Q9C002 AC097359.3-201ENST00000603982 1210 ntBASIC12.73□□□□□ -0.37
NMES1Q9C002 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
NMES1Q9C002 AC116407.4-201ENST00000623319 1061 ntBASIC12.73□□□□□ -0.37
NMES1Q9C002 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC12.73□□□□□ -0.37
NMES1Q9C002 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC12.73□□□□□ -0.37
NMES1Q9C002 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC12.73□□□□□ -0.37
NMES1Q9C002 LSS-211ENST00000522411 2523 ntTSL 2 BASIC12.73□□□□□ -0.37
NMES1Q9C002 HBP1-212ENST00000485846 2420 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
NMES1Q9C002 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC12.73□□□□□ -0.37
NMES1Q9C002 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
NMES1Q9C002 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC12.73□□□□□ -0.37
NMES1Q9C002 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC12.73□□□□□ -0.37
NMES1Q9C002 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC12.73□□□□□ -0.37
NMES1Q9C002 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC12.73□□□□□ -0.37
NMES1Q9C002 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
NMES1Q9C002 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
NMES1Q9C002 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
NMES1Q9C002 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
NMES1Q9C002 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
NMES1Q9C002 IRAK3-201ENST00000261233 8663 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
NMES1Q9C002 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
NMES1Q9C002 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
NMES1Q9C002 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
NMES1Q9C002 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC12.73□□□□□ -0.37
NMES1Q9C002 DSN1-207ENST00000448110 2129 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
NMES1Q9C002 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
NMES1Q9C002 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
NMES1Q9C002 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
NMES1Q9C002 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
NMES1Q9C002 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
NMES1Q9C002 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC12.73□□□□□ -0.37
NMES1Q9C002 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC12.72□□□□□ -0.37
NMES1Q9C002 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
NMES1Q9C002 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
NMES1Q9C002 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
NMES1Q9C002 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
NMES1Q9C002 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC12.72□□□□□ -0.37
NMES1Q9C002 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC12.72□□□□□ -0.37
NMES1Q9C002 COL6A4P2-202ENST00000504443 2753 ntBASIC12.72□□□□□ -0.37
NMES1Q9C002 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
NMES1Q9C002 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
NMES1Q9C002 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
NMES1Q9C002 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
NMES1Q9C002 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC12.72□□□□□ -0.37
NMES1Q9C002 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
NMES1Q9C002 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
NMES1Q9C002 DEPTOR-201ENST00000286234 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
NMES1Q9C002 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
NMES1Q9C002 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
NMES1Q9C002 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
NMES1Q9C002 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
NMES1Q9C002 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC12.72□□□□□ -0.37
NMES1Q9C002 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
NMES1Q9C002 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
NMES1Q9C002 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
NMES1Q9C002 RAB17-203ENST00000409576 466 ntTSL 3 BASIC12.72□□□□□ -0.37
NMES1Q9C002 AC092474.2-201ENST00000424288 719 ntBASIC12.72□□□□□ -0.37
NMES1Q9C002 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
NMES1Q9C002 FGFR3P6-201ENST00000457012 610 ntBASIC12.72□□□□□ -0.37
NMES1Q9C002 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC12.72□□□□□ -0.37
NMES1Q9C002 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC12.72□□□□□ -0.37
NMES1Q9C002 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC12.72□□□□□ -0.37
NMES1Q9C002 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
NMES1Q9C002 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC12.72□□□□□ -0.37
NMES1Q9C002 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC12.72□□□□□ -0.37
NMES1Q9C002 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC12.72□□□□□ -0.37
NMES1Q9C002 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
NMES1Q9C002 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
NMES1Q9C002 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC12.72□□□□□ -0.37
NMES1Q9C002 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
NMES1Q9C002 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
NMES1Q9C002 SLC4A5-201ENST00000346834 6233 ntAPPRIS P4 TSL 5 BASIC12.72□□□□□ -0.37
NMES1Q9C002 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
NMES1Q9C002 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
NMES1Q9C002 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
NMES1Q9C002 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC12.72□□□□□ -0.37
NMES1Q9C002 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
NMES1Q9C002 MYO16-202ENST00000356711 6874 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
NMES1Q9C002 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
NMES1Q9C002 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
NMES1Q9C002 AC015818.8-201ENST00000587907 1519 ntBASIC12.72□□□□□ -0.37
NMES1Q9C002 NHLH2-202ENST00000369506 7226 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
NMES1Q9C002 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
NMES1Q9C002 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC12.72□□□□□ -0.37
NMES1Q9C002 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
NMES1Q9C002 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
NMES1Q9C002 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC12.71□□□□□ -0.37
NMES1Q9C002 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC12.71□□□□□ -0.37
NMES1Q9C002 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
NMES1Q9C002 HADH-202ENST00000403312 1752 ntTSL 5 BASIC12.71□□□□□ -0.37
NMES1Q9C002 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC12.71□□□□□ -0.37
NMES1Q9C002 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
NMES1Q9C002 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
NMES1Q9C002 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
NMES1Q9C002 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC12.71□□□□□ -0.37
NMES1Q9C002 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
NMES1Q9C002 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
NMES1Q9C002 XG-201ENST00000381174 2315 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms