Protein–RNA interactions for Protein: Q9BT76

UPK3B, Uroplakin-3b, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BQ9BT76 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
UPK3BQ9BT76 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
UPK3BQ9BT76 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
UPK3BQ9BT76 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
UPK3BQ9BT76 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
UPK3BQ9BT76 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
UPK3BQ9BT76 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
UPK3BQ9BT76 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC10.82□□□□□ -0.68
UPK3BQ9BT76 AP006294.1-201ENST00000415407 339 ntBASIC10.82□□□□□ -0.68
UPK3BQ9BT76 COX5BP8-201ENST00000416911 349 ntBASIC10.82□□□□□ -0.68
UPK3BQ9BT76 NME2P1-201ENST00000426182 414 ntBASIC10.82□□□□□ -0.68
UPK3BQ9BT76 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
UPK3BQ9BT76 AC005034.1-201ENST00000426657 489 ntBASIC10.82□□□□□ -0.68
UPK3BQ9BT76 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC10.82□□□□□ -0.68
UPK3BQ9BT76 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
UPK3BQ9BT76 AC011495.1-201ENST00000498085 584 ntBASIC10.82□□□□□ -0.68
UPK3BQ9BT76 AC104596.2-201ENST00000512793 793 ntBASIC10.82□□□□□ -0.68
UPK3BQ9BT76 AP005018.1-201ENST00000525475 301 ntBASIC10.82□□□□□ -0.68
UPK3BQ9BT76 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC10.82□□□□□ -0.68
UPK3BQ9BT76 EHF-205ENST00000527935 557 ntTSL 2 BASIC10.82□□□□□ -0.68
UPK3BQ9BT76 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC10.82□□□□□ -0.68
UPK3BQ9BT76 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC10.82□□□□□ -0.68
UPK3BQ9BT76 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC10.82□□□□□ -0.68
UPK3BQ9BT76 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC10.82□□□□□ -0.68
UPK3BQ9BT76 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC10.82□□□□□ -0.68
UPK3BQ9BT76 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC10.82□□□□□ -0.68
UPK3BQ9BT76 LINC01115-203ENST00000606068 577 ntBASIC10.82□□□□□ -0.68
UPK3BQ9BT76 AL391069.4-201ENST00000609583 481 ntBASIC10.82□□□□□ -0.68
UPK3BQ9BT76 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC10.82□□□□□ -0.68
UPK3BQ9BT76 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
UPK3BQ9BT76 AC007431.3-201ENST00000623221 587 ntBASIC10.82□□□□□ -0.68
UPK3BQ9BT76 AL158212.4-201ENST00000624062 1286 ntBASIC10.82□□□□□ -0.68
UPK3BQ9BT76 AL035252.4-201ENST00000624174 288 ntBASIC10.82□□□□□ -0.68
UPK3BQ9BT76 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
UPK3BQ9BT76 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
UPK3BQ9BT76 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC10.82□□□□□ -0.68
UPK3BQ9BT76 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
UPK3BQ9BT76 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
UPK3BQ9BT76 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC10.82□□□□□ -0.68
UPK3BQ9BT76 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC10.82□□□□□ -0.68
UPK3BQ9BT76 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
UPK3BQ9BT76 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
UPK3BQ9BT76 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
UPK3BQ9BT76 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC10.82□□□□□ -0.68
UPK3BQ9BT76 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC10.82□□□□□ -0.68
UPK3BQ9BT76 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC10.82□□□□□ -0.68
UPK3BQ9BT76 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
UPK3BQ9BT76 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC10.82□□□□□ -0.68
UPK3BQ9BT76 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC10.82□□□□□ -0.68
UPK3BQ9BT76 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
UPK3BQ9BT76 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
UPK3BQ9BT76 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
UPK3BQ9BT76 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC10.82□□□□□ -0.68
UPK3BQ9BT76 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC10.81□□□□□ -0.68
UPK3BQ9BT76 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC10.81□□□□□ -0.68
UPK3BQ9BT76 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC10.81□□□□□ -0.68
UPK3BQ9BT76 BRWD1-201ENST00000333229 10141 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
UPK3BQ9BT76 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
UPK3BQ9BT76 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC10.81□□□□□ -0.68
UPK3BQ9BT76 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
UPK3BQ9BT76 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC10.81□□□□□ -0.68
UPK3BQ9BT76 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC10.81□□□□□ -0.68
UPK3BQ9BT76 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
UPK3BQ9BT76 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
UPK3BQ9BT76 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
UPK3BQ9BT76 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
UPK3BQ9BT76 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC10.81□□□□□ -0.68
UPK3BQ9BT76 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
UPK3BQ9BT76 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
UPK3BQ9BT76 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
UPK3BQ9BT76 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
UPK3BQ9BT76 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
UPK3BQ9BT76 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
UPK3BQ9BT76 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC10.81□□□□□ -0.68
UPK3BQ9BT76 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
UPK3BQ9BT76 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
UPK3BQ9BT76 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
UPK3BQ9BT76 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC10.81□□□□□ -0.68
UPK3BQ9BT76 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC10.81□□□□□ -0.68
UPK3BQ9BT76 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC10.81□□□□□ -0.68
UPK3BQ9BT76 RAC2-202ENST00000401529 569 ntTSL 4 BASIC10.81□□□□□ -0.68
UPK3BQ9BT76 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC10.81□□□□□ -0.68
UPK3BQ9BT76 AC074338.1-201ENST00000416825 156 ntBASIC10.81□□□□□ -0.68
UPK3BQ9BT76 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC10.81□□□□□ -0.68
UPK3BQ9BT76 AL589987.1-201ENST00000453380 819 ntBASIC10.81□□□□□ -0.68
UPK3BQ9BT76 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
UPK3BQ9BT76 FADS2-205ENST00000517839 469 ntTSL 3 BASIC10.81□□□□□ -0.68
UPK3BQ9BT76 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC10.81□□□□□ -0.68
UPK3BQ9BT76 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC10.81□□□□□ -0.68
UPK3BQ9BT76 AC123567.1-201ENST00000548294 1261 ntBASIC10.81□□□□□ -0.68
UPK3BQ9BT76 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC10.81□□□□□ -0.68
UPK3BQ9BT76 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC10.81□□□□□ -0.68
UPK3BQ9BT76 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC10.81□□□□□ -0.68
UPK3BQ9BT76 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC10.81□□□□□ -0.68
UPK3BQ9BT76 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC10.81□□□□□ -0.68
UPK3BQ9BT76 AC097359.3-201ENST00000603982 1210 ntBASIC10.81□□□□□ -0.68
UPK3BQ9BT76 TMEM261P1-201ENST00000604899 340 ntBASIC10.81□□□□□ -0.68
UPK3BQ9BT76 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC10.81□□□□□ -0.68
UPK3BQ9BT76 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
UPK3BQ9BT76 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Retrieved 100 of 98,524 protein–RNA pairs in 59 ms