Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 MEIS3P1-201ENST00000495167 958 ntBASIC13.95□□□□□ -0.18
USB1Q9BQ65 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC13.95□□□□□ -0.18
USB1Q9BQ65 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
USB1Q9BQ65 RAB35-202ENST00000534951 939 ntTSL 2 BASIC13.95□□□□□ -0.18
USB1Q9BQ65 CDK4-206ENST00000549606 558 ntTSL 2 BASIC13.95□□□□□ -0.18
USB1Q9BQ65 COQ9-214ENST00000567933 882 ntTSL 3 BASIC13.95□□□□□ -0.18
USB1Q9BQ65 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC13.95□□□□□ -0.18
USB1Q9BQ65 SMIM11B-202ENST00000619874 843 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
USB1Q9BQ65 AC007191.1-201ENST00000623179 2995 ntBASIC13.95□□□□□ -0.18
USB1Q9BQ65 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
USB1Q9BQ65 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
USB1Q9BQ65 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
USB1Q9BQ65 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
USB1Q9BQ65 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
USB1Q9BQ65 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
USB1Q9BQ65 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC13.95□□□□□ -0.18
USB1Q9BQ65 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
USB1Q9BQ65 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC13.95□□□□□ -0.18
USB1Q9BQ65 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
USB1Q9BQ65 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
USB1Q9BQ65 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
USB1Q9BQ65 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC13.95□□□□□ -0.18
USB1Q9BQ65 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC13.95□□□□□ -0.18
USB1Q9BQ65 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC13.95□□□□□ -0.18
USB1Q9BQ65 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC13.94□□□□□ -0.18
USB1Q9BQ65 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
USB1Q9BQ65 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
USB1Q9BQ65 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
USB1Q9BQ65 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC13.94□□□□□ -0.18
USB1Q9BQ65 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
USB1Q9BQ65 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
USB1Q9BQ65 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC13.94□□□□□ -0.18
USB1Q9BQ65 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
USB1Q9BQ65 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
USB1Q9BQ65 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
USB1Q9BQ65 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
USB1Q9BQ65 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
USB1Q9BQ65 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
USB1Q9BQ65 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC13.94□□□□□ -0.18
USB1Q9BQ65 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
USB1Q9BQ65 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
USB1Q9BQ65 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
USB1Q9BQ65 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
USB1Q9BQ65 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
USB1Q9BQ65 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
USB1Q9BQ65 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC13.94□□□□□ -0.18
USB1Q9BQ65 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
USB1Q9BQ65 GRK6P1-201ENST00000400595 1711 ntBASIC13.94□□□□□ -0.18
USB1Q9BQ65 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC13.94□□□□□ -0.18
USB1Q9BQ65 HIST3H2BA-201ENST00000436555 524 ntBASIC13.94□□□□□ -0.18
USB1Q9BQ65 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
USB1Q9BQ65 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC13.94□□□□□ -0.18
USB1Q9BQ65 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC13.94□□□□□ -0.18
USB1Q9BQ65 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
USB1Q9BQ65 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC13.94□□□□□ -0.18
USB1Q9BQ65 BLK-205ENST00000529894 2017 ntTSL 5 BASIC13.94□□□□□ -0.18
USB1Q9BQ65 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC13.94□□□□□ -0.18
USB1Q9BQ65 TPRX2P-201ENST00000535362 881 ntBASIC13.94□□□□□ -0.18
USB1Q9BQ65 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
USB1Q9BQ65 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
USB1Q9BQ65 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC13.94□□□□□ -0.18
USB1Q9BQ65 ETFRF1-209ENST00000556885 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
USB1Q9BQ65 AC104794.3-201ENST00000566840 1248 ntBASIC13.94□□□□□ -0.18
USB1Q9BQ65 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC13.94□□□□□ -0.18
USB1Q9BQ65 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC13.94□□□□□ -0.18
USB1Q9BQ65 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC13.94□□□□□ -0.18
USB1Q9BQ65 AL132655.2-201ENST00000596276 594 ntBASIC13.94□□□□□ -0.18
USB1Q9BQ65 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC13.94□□□□□ -0.18
USB1Q9BQ65 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC13.94□□□□□ -0.18
USB1Q9BQ65 CU639417.3-201ENST00000624240 1404 ntBASIC13.94□□□□□ -0.18
USB1Q9BQ65 AC025048.6-201ENST00000634326 1161 ntBASIC13.94□□□□□ -0.18
USB1Q9BQ65 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC13.94□□□□□ -0.18
USB1Q9BQ65 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
USB1Q9BQ65 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC13.94□□□□□ -0.18
USB1Q9BQ65 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
USB1Q9BQ65 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
USB1Q9BQ65 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC13.94□□□□□ -0.18
USB1Q9BQ65 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
USB1Q9BQ65 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
USB1Q9BQ65 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
USB1Q9BQ65 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC13.94□□□□□ -0.18
USB1Q9BQ65 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC13.94□□□□□ -0.18
USB1Q9BQ65 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
USB1Q9BQ65 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
USB1Q9BQ65 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC13.94□□□□□ -0.18
USB1Q9BQ65 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
USB1Q9BQ65 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC13.94□□□□□ -0.18
USB1Q9BQ65 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC13.94□□□□□ -0.18
USB1Q9BQ65 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
USB1Q9BQ65 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
USB1Q9BQ65 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
USB1Q9BQ65 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
USB1Q9BQ65 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
USB1Q9BQ65 MLX-202ENST00000346833 2334 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
USB1Q9BQ65 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
USB1Q9BQ65 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
USB1Q9BQ65 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
USB1Q9BQ65 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC13.93□□□□□ -0.18
USB1Q9BQ65 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
USB1Q9BQ65 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms