Protein–RNA interactions for Protein: Q99684

GFI1, Zinc finger protein Gfi-1, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFI1Q99684 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
GFI1Q99684 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC13.29□□□□□ -0.28
GFI1Q99684 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC13.29□□□□□ -0.28
GFI1Q99684 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
GFI1Q99684 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC13.29□□□□□ -0.28
GFI1Q99684 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC13.29□□□□□ -0.28
GFI1Q99684 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC13.29□□□□□ -0.28
GFI1Q99684 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
GFI1Q99684 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
GFI1Q99684 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
GFI1Q99684 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
GFI1Q99684 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
GFI1Q99684 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
GFI1Q99684 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
GFI1Q99684 CNTNAP3P2-201ENST00000617175 3861 ntBASIC13.29□□□□□ -0.28
GFI1Q99684 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC13.29□□□□□ -0.28
GFI1Q99684 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
GFI1Q99684 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC13.29□□□□□ -0.28
GFI1Q99684 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
GFI1Q99684 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC13.28□□□□□ -0.28
GFI1Q99684 RDX-218ENST00000544551 4117 ntTSL 2 BASIC13.28□□□□□ -0.28
GFI1Q99684 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
GFI1Q99684 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
GFI1Q99684 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
GFI1Q99684 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
GFI1Q99684 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
GFI1Q99684 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
GFI1Q99684 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
GFI1Q99684 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
GFI1Q99684 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
GFI1Q99684 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
GFI1Q99684 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
GFI1Q99684 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
GFI1Q99684 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
GFI1Q99684 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC13.28□□□□□ -0.28
GFI1Q99684 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC13.28□□□□□ -0.28
GFI1Q99684 AC055811.4-201ENST00000624039 1754 ntBASIC13.28□□□□□ -0.28
GFI1Q99684 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC13.28□□□□□ -0.28
GFI1Q99684 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
GFI1Q99684 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
GFI1Q99684 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
GFI1Q99684 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
GFI1Q99684 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
GFI1Q99684 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
GFI1Q99684 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
GFI1Q99684 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
GFI1Q99684 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
GFI1Q99684 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC13.28□□□□□ -0.28
GFI1Q99684 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC13.28□□□□□ -0.28
GFI1Q99684 TIMM8BP1-201ENST00000452384 211 ntBASIC13.28□□□□□ -0.28
GFI1Q99684 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC13.28□□□□□ -0.28
GFI1Q99684 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC13.28□□□□□ -0.28
GFI1Q99684 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC13.28□□□□□ -0.28
GFI1Q99684 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC13.28□□□□□ -0.28
GFI1Q99684 COX5A-206ENST00000568783 571 ntTSL 3 BASIC13.28□□□□□ -0.28
GFI1Q99684 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC13.28□□□□□ -0.28
GFI1Q99684 TBCB-211ENST00000589996 724 ntTSL 3 BASIC13.28□□□□□ -0.28
GFI1Q99684 CITED2-204ENST00000618718 901 ntTSL 2 BASIC13.28□□□□□ -0.28
GFI1Q99684 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
GFI1Q99684 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
GFI1Q99684 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
GFI1Q99684 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
GFI1Q99684 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC13.28□□□□□ -0.28
GFI1Q99684 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
GFI1Q99684 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC13.28□□□□□ -0.28
GFI1Q99684 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC13.28□□□□□ -0.28
GFI1Q99684 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
GFI1Q99684 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC13.28□□□□□ -0.28
GFI1Q99684 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
GFI1Q99684 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
GFI1Q99684 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
GFI1Q99684 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
GFI1Q99684 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
GFI1Q99684 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
GFI1Q99684 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
GFI1Q99684 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
GFI1Q99684 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
GFI1Q99684 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
GFI1Q99684 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
GFI1Q99684 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
GFI1Q99684 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
GFI1Q99684 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
GFI1Q99684 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
GFI1Q99684 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
GFI1Q99684 CICP17-201ENST00000418553 2377 ntBASIC13.27□□□□□ -0.29
GFI1Q99684 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC13.27□□□□□ -0.29
GFI1Q99684 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
GFI1Q99684 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
GFI1Q99684 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
GFI1Q99684 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
GFI1Q99684 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.29
GFI1Q99684 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
GFI1Q99684 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
GFI1Q99684 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC13.27□□□□□ -0.29
GFI1Q99684 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
GFI1Q99684 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC13.27□□□□□ -0.29
GFI1Q99684 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
GFI1Q99684 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC13.27□□□□□ -0.29
GFI1Q99684 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC13.27□□□□□ -0.29
GFI1Q99684 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC13.27□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms