Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 AC026979.3-201ENST00000607315 403 ntBASIC12.57□□□□□ -0.4
RAB40CQ96S21 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC12.57□□□□□ -0.4
RAB40CQ96S21 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
RAB40CQ96S21 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC12.57□□□□□ -0.4
RAB40CQ96S21 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
RAB40CQ96S21 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
RAB40CQ96S21 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC12.57□□□□□ -0.4
RAB40CQ96S21 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC12.57□□□□□ -0.4
RAB40CQ96S21 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC12.57□□□□□ -0.4
RAB40CQ96S21 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC12.57□□□□□ -0.4
RAB40CQ96S21 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
RAB40CQ96S21 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC12.57□□□□□ -0.4
RAB40CQ96S21 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC12.57□□□□□ -0.4
RAB40CQ96S21 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC12.57□□□□□ -0.4
RAB40CQ96S21 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
RAB40CQ96S21 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
RAB40CQ96S21 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC12.57□□□□□ -0.4
RAB40CQ96S21 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
RAB40CQ96S21 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC12.57□□□□□ -0.4
RAB40CQ96S21 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
RAB40CQ96S21 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
RAB40CQ96S21 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
RAB40CQ96S21 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
RAB40CQ96S21 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC12.56□□□□□ -0.4
RAB40CQ96S21 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
RAB40CQ96S21 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC12.56□□□□□ -0.4
RAB40CQ96S21 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC12.56□□□□□ -0.4
RAB40CQ96S21 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
RAB40CQ96S21 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
RAB40CQ96S21 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
RAB40CQ96S21 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC12.56□□□□□ -0.4
RAB40CQ96S21 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
RAB40CQ96S21 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
RAB40CQ96S21 MTHFR-210ENST00000641407 2387 ntBASIC12.56□□□□□ -0.4
RAB40CQ96S21 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
RAB40CQ96S21 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
RAB40CQ96S21 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
RAB40CQ96S21 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
RAB40CQ96S21 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
RAB40CQ96S21 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
RAB40CQ96S21 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
RAB40CQ96S21 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC12.56□□□□□ -0.4
RAB40CQ96S21 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
RAB40CQ96S21 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
RAB40CQ96S21 AC136604.1-201ENST00000418535 575 ntBASIC12.56□□□□□ -0.4
RAB40CQ96S21 FDX1P1-201ENST00000449115 551 ntBASIC12.56□□□□□ -0.4
RAB40CQ96S21 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC12.56□□□□□ -0.4
RAB40CQ96S21 RNA5SP410-201ENST00000516285 106 ntBASIC12.56□□□□□ -0.4
RAB40CQ96S21 RNA5SP415-201ENST00000517246 115 ntBASIC12.56□□□□□ -0.4
RAB40CQ96S21 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC12.56□□□□□ -0.4
RAB40CQ96S21 COQ9-214ENST00000567933 882 ntTSL 3 BASIC12.56□□□□□ -0.4
RAB40CQ96S21 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC12.56□□□□□ -0.4
RAB40CQ96S21 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
RAB40CQ96S21 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
RAB40CQ96S21 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC12.56□□□□□ -0.4
RAB40CQ96S21 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC12.56□□□□□ -0.4
RAB40CQ96S21 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
RAB40CQ96S21 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC12.56□□□□□ -0.4
RAB40CQ96S21 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
RAB40CQ96S21 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
RAB40CQ96S21 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC12.56□□□□□ -0.4
RAB40CQ96S21 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
RAB40CQ96S21 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC12.56□□□□□ -0.4
RAB40CQ96S21 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
RAB40CQ96S21 PRDM10-204ENST00000423662 5998 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
RAB40CQ96S21 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
RAB40CQ96S21 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
RAB40CQ96S21 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
RAB40CQ96S21 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
RAB40CQ96S21 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
RAB40CQ96S21 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
RAB40CQ96S21 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC12.56□□□□□ -0.4
RAB40CQ96S21 TET3-201ENST00000305799 5174 ntTSL 5 BASIC12.56□□□□□ -0.4
RAB40CQ96S21 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
RAB40CQ96S21 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC12.55□□□□□ -0.4
RAB40CQ96S21 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
RAB40CQ96S21 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
RAB40CQ96S21 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC12.55□□□□□ -0.4
RAB40CQ96S21 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC12.55□□□□□ -0.4
RAB40CQ96S21 AMT-224ENST00000635808 1610 ntTSL 5 BASIC12.55□□□□□ -0.4
RAB40CQ96S21 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC12.55□□□□□ -0.4
RAB40CQ96S21 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
RAB40CQ96S21 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
RAB40CQ96S21 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
RAB40CQ96S21 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
RAB40CQ96S21 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
RAB40CQ96S21 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
RAB40CQ96S21 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
RAB40CQ96S21 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC12.55□□□□□ -0.4
RAB40CQ96S21 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC12.55□□□□□ -0.4
RAB40CQ96S21 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC12.55□□□□□ -0.4
RAB40CQ96S21 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
RAB40CQ96S21 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
RAB40CQ96S21 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
RAB40CQ96S21 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
RAB40CQ96S21 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
RAB40CQ96S21 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
RAB40CQ96S21 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
RAB40CQ96S21 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC12.55□□□□□ -0.4
RAB40CQ96S21 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 67.6 ms