Protein–RNA interactions for Protein: Q96FT9

IFT43, Intraflagellar transport protein 43 homolog, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43Q96FT9 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
IFT43Q96FT9 AC093004.1-201ENST00000508850 424 ntBASIC15.96■□□□□ 0.15
IFT43Q96FT9 SDHAP3-202ENST00000515467 728 ntBASIC15.96■□□□□ 0.15
IFT43Q96FT9 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC15.96■□□□□ 0.15
IFT43Q96FT9 API5-211ENST00000534695 560 ntTSL 5 BASIC15.96■□□□□ 0.15
IFT43Q96FT9 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
IFT43Q96FT9 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC15.96■□□□□ 0.15
IFT43Q96FT9 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC15.96■□□□□ 0.15
IFT43Q96FT9 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC15.96■□□□□ 0.15
IFT43Q96FT9 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC15.96■□□□□ 0.15
IFT43Q96FT9 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC15.96■□□□□ 0.15
IFT43Q96FT9 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
IFT43Q96FT9 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.15
IFT43Q96FT9 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
IFT43Q96FT9 AC087481.3-201ENST00000602886 1894 ntBASIC15.96■□□□□ 0.15
IFT43Q96FT9 AC020658.6-201ENST00000623564 1870 ntBASIC15.96■□□□□ 0.15
IFT43Q96FT9 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC15.96■□□□□ 0.15
IFT43Q96FT9 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC15.96■□□□□ 0.15
IFT43Q96FT9 TPO-203ENST00000346956 2923 ntTSL 5 BASIC15.96■□□□□ 0.15
IFT43Q96FT9 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
IFT43Q96FT9 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC15.96■□□□□ 0.15
IFT43Q96FT9 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
IFT43Q96FT9 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC15.96■□□□□ 0.15
IFT43Q96FT9 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC15.96■□□□□ 0.15
IFT43Q96FT9 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
IFT43Q96FT9 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
IFT43Q96FT9 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC15.96■□□□□ 0.14
IFT43Q96FT9 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
IFT43Q96FT9 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
IFT43Q96FT9 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
IFT43Q96FT9 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
IFT43Q96FT9 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC15.96■□□□□ 0.14
IFT43Q96FT9 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
IFT43Q96FT9 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
IFT43Q96FT9 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
IFT43Q96FT9 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
IFT43Q96FT9 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
IFT43Q96FT9 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
IFT43Q96FT9 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
IFT43Q96FT9 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC15.95■□□□□ 0.14
IFT43Q96FT9 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC15.95■□□□□ 0.14
IFT43Q96FT9 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
IFT43Q96FT9 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
IFT43Q96FT9 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
IFT43Q96FT9 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC15.95■□□□□ 0.14
IFT43Q96FT9 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC15.95■□□□□ 0.14
IFT43Q96FT9 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
IFT43Q96FT9 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
IFT43Q96FT9 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
IFT43Q96FT9 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
IFT43Q96FT9 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
IFT43Q96FT9 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
IFT43Q96FT9 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC15.95■□□□□ 0.14
IFT43Q96FT9 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
IFT43Q96FT9 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC15.95■□□□□ 0.14
IFT43Q96FT9 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC15.95■□□□□ 0.14
IFT43Q96FT9 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC15.95■□□□□ 0.14
IFT43Q96FT9 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC15.95■□□□□ 0.14
IFT43Q96FT9 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC15.95■□□□□ 0.14
IFT43Q96FT9 AC025048.3-201ENST00000590609 569 ntBASIC15.95■□□□□ 0.14
IFT43Q96FT9 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
IFT43Q96FT9 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
IFT43Q96FT9 AC005702.4-201ENST00000618393 416 ntBASIC15.95■□□□□ 0.14
IFT43Q96FT9 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
IFT43Q96FT9 AC127383.1-201ENST00000444697 1800 ntBASIC15.95■□□□□ 0.14
IFT43Q96FT9 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
IFT43Q96FT9 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
IFT43Q96FT9 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC15.95■□□□□ 0.14
IFT43Q96FT9 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
IFT43Q96FT9 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC15.95■□□□□ 0.14
IFT43Q96FT9 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
IFT43Q96FT9 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
IFT43Q96FT9 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC15.95■□□□□ 0.14
IFT43Q96FT9 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC15.95■□□□□ 0.14
IFT43Q96FT9 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC15.95■□□□□ 0.14
IFT43Q96FT9 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
IFT43Q96FT9 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC15.95■□□□□ 0.14
IFT43Q96FT9 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
IFT43Q96FT9 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
IFT43Q96FT9 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
IFT43Q96FT9 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
IFT43Q96FT9 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
IFT43Q96FT9 GSN-203ENST00000373808 2664 ntTSL 2 BASIC15.94■□□□□ 0.14
IFT43Q96FT9 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC15.94■□□□□ 0.14
IFT43Q96FT9 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
IFT43Q96FT9 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
IFT43Q96FT9 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
IFT43Q96FT9 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
IFT43Q96FT9 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
IFT43Q96FT9 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
IFT43Q96FT9 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
IFT43Q96FT9 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
IFT43Q96FT9 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
IFT43Q96FT9 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
IFT43Q96FT9 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC15.94■□□□□ 0.14
IFT43Q96FT9 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
IFT43Q96FT9 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
IFT43Q96FT9 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC15.94■□□□□ 0.14
IFT43Q96FT9 MEP1AP4-201ENST00000423244 1087 ntBASIC15.94■□□□□ 0.14
IFT43Q96FT9 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 79.6 ms