Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
PTP4A1Q93096 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
PTP4A1Q93096 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC13.9□□□□□ -0.18
PTP4A1Q93096 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
PTP4A1Q93096 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
PTP4A1Q93096 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC13.9□□□□□ -0.18
PTP4A1Q93096 HLA-J-203ENST00000494367 1087 ntBASIC13.9□□□□□ -0.18
PTP4A1Q93096 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC13.9□□□□□ -0.18
PTP4A1Q93096 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
PTP4A1Q93096 AL512356.2-201ENST00000546955 174 ntBASIC13.9□□□□□ -0.18
PTP4A1Q93096 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC13.9□□□□□ -0.18
PTP4A1Q93096 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC13.9□□□□□ -0.18
PTP4A1Q93096 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
PTP4A1Q93096 AP001160.2-201ENST00000596071 487 ntBASIC13.9□□□□□ -0.18
PTP4A1Q93096 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC13.9□□□□□ -0.18
PTP4A1Q93096 GOLGA6L17P-202ENST00000614358 1398 ntBASIC13.9□□□□□ -0.18
PTP4A1Q93096 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
PTP4A1Q93096 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
PTP4A1Q93096 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
PTP4A1Q93096 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC13.9□□□□□ -0.18
PTP4A1Q93096 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
PTP4A1Q93096 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
PTP4A1Q93096 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
PTP4A1Q93096 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC13.9□□□□□ -0.18
PTP4A1Q93096 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
PTP4A1Q93096 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
PTP4A1Q93096 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
PTP4A1Q93096 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC13.9□□□□□ -0.18
PTP4A1Q93096 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
PTP4A1Q93096 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
PTP4A1Q93096 CICP20-201ENST00000443330 2801 ntBASIC13.9□□□□□ -0.18
PTP4A1Q93096 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC13.9□□□□□ -0.18
PTP4A1Q93096 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
PTP4A1Q93096 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
PTP4A1Q93096 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC13.9□□□□□ -0.18
PTP4A1Q93096 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
PTP4A1Q93096 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
PTP4A1Q93096 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
PTP4A1Q93096 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
PTP4A1Q93096 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.19
PTP4A1Q93096 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
PTP4A1Q93096 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
PTP4A1Q93096 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
PTP4A1Q93096 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
PTP4A1Q93096 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
PTP4A1Q93096 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC13.89□□□□□ -0.19
PTP4A1Q93096 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
PTP4A1Q93096 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
PTP4A1Q93096 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
PTP4A1Q93096 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
PTP4A1Q93096 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
PTP4A1Q93096 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
PTP4A1Q93096 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC13.89□□□□□ -0.19
PTP4A1Q93096 RPS19-201ENST00000221975 500 ntTSL 3 BASIC13.89□□□□□ -0.19
PTP4A1Q93096 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
PTP4A1Q93096 USP40-206ENST00000443711 628 ntTSL 2 BASIC13.89□□□□□ -0.19
PTP4A1Q93096 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC13.89□□□□□ -0.19
PTP4A1Q93096 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
PTP4A1Q93096 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
PTP4A1Q93096 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC13.89□□□□□ -0.19
PTP4A1Q93096 AC011467.4-201ENST00000594891 528 ntBASIC13.89□□□□□ -0.19
PTP4A1Q93096 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
PTP4A1Q93096 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
PTP4A1Q93096 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC13.89□□□□□ -0.19
PTP4A1Q93096 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
PTP4A1Q93096 AC007967.4-201ENST00000614700 386 ntBASIC13.89□□□□□ -0.19
PTP4A1Q93096 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC13.89□□□□□ -0.19
PTP4A1Q93096 LINC00628-201ENST00000628516 1289 ntBASIC13.89□□□□□ -0.19
PTP4A1Q93096 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC13.89□□□□□ -0.19
PTP4A1Q93096 RAB34-224ENST00000636513 888 ntTSL 5 BASIC13.89□□□□□ -0.19
PTP4A1Q93096 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
PTP4A1Q93096 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
PTP4A1Q93096 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
PTP4A1Q93096 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC13.89□□□□□ -0.19
PTP4A1Q93096 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
PTP4A1Q93096 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
PTP4A1Q93096 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC13.89□□□□□ -0.19
PTP4A1Q93096 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
PTP4A1Q93096 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
PTP4A1Q93096 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
PTP4A1Q93096 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC13.89□□□□□ -0.19
PTP4A1Q93096 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
PTP4A1Q93096 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
PTP4A1Q93096 FLJ16779-201ENST00000612722 7638 ntBASIC13.89□□□□□ -0.19
PTP4A1Q93096 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
PTP4A1Q93096 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
PTP4A1Q93096 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
PTP4A1Q93096 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC13.88□□□□□ -0.19
PTP4A1Q93096 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
PTP4A1Q93096 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
PTP4A1Q93096 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
PTP4A1Q93096 AC068587.6-202ENST00000641839 5619 ntBASIC13.88□□□□□ -0.19
PTP4A1Q93096 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
PTP4A1Q93096 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC13.88□□□□□ -0.19
PTP4A1Q93096 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
PTP4A1Q93096 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
PTP4A1Q93096 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
PTP4A1Q93096 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
PTP4A1Q93096 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
PTP4A1Q93096 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 61.8 ms