Protein–RNA interactions for Protein: Q8TAB3

PCDH19, Protocadherin-19, humanhuman

Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19Q8TAB3 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
PCDH19Q8TAB3 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
PCDH19Q8TAB3 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PCDH19Q8TAB3 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PCDH19Q8TAB3 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC15.91■□□□□ 0.14
PCDH19Q8TAB3 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
PCDH19Q8TAB3 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC15.91■□□□□ 0.14
PCDH19Q8TAB3 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC15.91■□□□□ 0.14
PCDH19Q8TAB3 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC15.91■□□□□ 0.14
PCDH19Q8TAB3 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC15.91■□□□□ 0.14
PCDH19Q8TAB3 RN7SL399P-201ENST00000471648 279 ntBASIC15.91■□□□□ 0.14
PCDH19Q8TAB3 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC15.91■□□□□ 0.14
PCDH19Q8TAB3 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
PCDH19Q8TAB3 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC15.91■□□□□ 0.14
PCDH19Q8TAB3 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC15.91■□□□□ 0.14
PCDH19Q8TAB3 SAMD11P1-201ENST00000571429 661 ntBASIC15.91■□□□□ 0.14
PCDH19Q8TAB3 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC15.91■□□□□ 0.14
PCDH19Q8TAB3 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
PCDH19Q8TAB3 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC15.91■□□□□ 0.14
PCDH19Q8TAB3 CECR7-204ENST00000609932 568 ntTSL 2 BASIC15.91■□□□□ 0.14
PCDH19Q8TAB3 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC15.91■□□□□ 0.14
PCDH19Q8TAB3 AC106881.1-201ENST00000605849 3329 ntBASIC15.91■□□□□ 0.14
PCDH19Q8TAB3 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
PCDH19Q8TAB3 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PCDH19Q8TAB3 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC15.91■□□□□ 0.14
PCDH19Q8TAB3 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
PCDH19Q8TAB3 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
PCDH19Q8TAB3 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
PCDH19Q8TAB3 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC15.91■□□□□ 0.14
PCDH19Q8TAB3 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PCDH19Q8TAB3 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC15.91■□□□□ 0.14
PCDH19Q8TAB3 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
PCDH19Q8TAB3 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
PCDH19Q8TAB3 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PCDH19Q8TAB3 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
PCDH19Q8TAB3 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PCDH19Q8TAB3 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC15.91■□□□□ 0.14
PCDH19Q8TAB3 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
PCDH19Q8TAB3 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
PCDH19Q8TAB3 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PCDH19Q8TAB3 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC15.9■□□□□ 0.14
PCDH19Q8TAB3 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC15.9■□□□□ 0.14
PCDH19Q8TAB3 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PCDH19Q8TAB3 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC15.9■□□□□ 0.14
PCDH19Q8TAB3 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PCDH19Q8TAB3 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
PCDH19Q8TAB3 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
PCDH19Q8TAB3 FGD5P1-202ENST00000614866 2498 ntBASIC15.9■□□□□ 0.14
PCDH19Q8TAB3 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC15.9■□□□□ 0.14
PCDH19Q8TAB3 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC15.9■□□□□ 0.14
PCDH19Q8TAB3 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
PCDH19Q8TAB3 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PCDH19Q8TAB3 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
PCDH19Q8TAB3 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
PCDH19Q8TAB3 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PCDH19Q8TAB3 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
PCDH19Q8TAB3 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PCDH19Q8TAB3 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PCDH19Q8TAB3 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
PCDH19Q8TAB3 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
PCDH19Q8TAB3 SPTLC1P1-201ENST00000447199 261 ntBASIC15.9■□□□□ 0.14
PCDH19Q8TAB3 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC15.9■□□□□ 0.14
PCDH19Q8TAB3 AP005018.1-201ENST00000525475 301 ntBASIC15.9■□□□□ 0.14
PCDH19Q8TAB3 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC15.9■□□□□ 0.14
PCDH19Q8TAB3 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC15.9■□□□□ 0.14
PCDH19Q8TAB3 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC15.9■□□□□ 0.14
PCDH19Q8TAB3 AC036164.1-201ENST00000570544 333 ntBASIC15.9■□□□□ 0.14
PCDH19Q8TAB3 AL662799.1-202ENST00000614205 422 ntBASIC15.9■□□□□ 0.14
PCDH19Q8TAB3 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC15.9■□□□□ 0.14
PCDH19Q8TAB3 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
PCDH19Q8TAB3 DRD5P1-201ENST00000456605 1438 ntBASIC15.9■□□□□ 0.14
PCDH19Q8TAB3 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC15.9■□□□□ 0.14
PCDH19Q8TAB3 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
PCDH19Q8TAB3 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PCDH19Q8TAB3 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC15.9■□□□□ 0.14
PCDH19Q8TAB3 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PCDH19Q8TAB3 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
PCDH19Q8TAB3 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PCDH19Q8TAB3 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC15.9■□□□□ 0.14
PCDH19Q8TAB3 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
PCDH19Q8TAB3 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
PCDH19Q8TAB3 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PCDH19Q8TAB3 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
PCDH19Q8TAB3 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
PCDH19Q8TAB3 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PCDH19Q8TAB3 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC15.89■□□□□ 0.13
PCDH19Q8TAB3 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PCDH19Q8TAB3 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
PCDH19Q8TAB3 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
PCDH19Q8TAB3 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PCDH19Q8TAB3 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PCDH19Q8TAB3 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
PCDH19Q8TAB3 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
PCDH19Q8TAB3 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
PCDH19Q8TAB3 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC15.89■□□□□ 0.13
PCDH19Q8TAB3 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC15.89■□□□□ 0.13
PCDH19Q8TAB3 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC15.89■□□□□ 0.13
PCDH19Q8TAB3 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC15.89■□□□□ 0.13
PCDH19Q8TAB3 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PCDH19Q8TAB3 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC15.89■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms