Protein–RNA interactions for Protein: Q8IZ52

CHPF, Chondroitin sulfate synthase 2, humanhuman

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHPFQ8IZ52 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CHPFQ8IZ52 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CHPFQ8IZ52 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
CHPFQ8IZ52 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC15.69■□□□□ 0.1
CHPFQ8IZ52 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
CHPFQ8IZ52 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CHPFQ8IZ52 GUK1-206ENST00000366723 845 ntTSL 5 BASIC15.69■□□□□ 0.1
CHPFQ8IZ52 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC15.69■□□□□ 0.1
CHPFQ8IZ52 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CHPFQ8IZ52 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC15.69■□□□□ 0.1
CHPFQ8IZ52 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC15.69■□□□□ 0.1
CHPFQ8IZ52 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CHPFQ8IZ52 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC15.69■□□□□ 0.1
CHPFQ8IZ52 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC15.69■□□□□ 0.1
CHPFQ8IZ52 AL603832.2-201ENST00000566195 2125 ntBASIC15.69■□□□□ 0.1
CHPFQ8IZ52 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC15.69■□□□□ 0.1
CHPFQ8IZ52 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC15.69■□□□□ 0.1
CHPFQ8IZ52 AC138951.2-201ENST00000623455 1161 ntBASIC15.69■□□□□ 0.1
CHPFQ8IZ52 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CHPFQ8IZ52 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CHPFQ8IZ52 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CHPFQ8IZ52 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CHPFQ8IZ52 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CHPFQ8IZ52 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CHPFQ8IZ52 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CHPFQ8IZ52 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CHPFQ8IZ52 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CHPFQ8IZ52 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CHPFQ8IZ52 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC15.68■□□□□ 0.1
CHPFQ8IZ52 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CHPFQ8IZ52 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CHPFQ8IZ52 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CHPFQ8IZ52 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CHPFQ8IZ52 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CHPFQ8IZ52 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC15.68■□□□□ 0.1
CHPFQ8IZ52 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC15.68■□□□□ 0.1
CHPFQ8IZ52 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CHPFQ8IZ52 KRT8P44-201ENST00000441609 1350 ntBASIC15.68■□□□□ 0.1
CHPFQ8IZ52 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC15.68■□□□□ 0.1
CHPFQ8IZ52 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
CHPFQ8IZ52 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CHPFQ8IZ52 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC15.68■□□□□ 0.1
CHPFQ8IZ52 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CHPFQ8IZ52 TPO-206ENST00000382269 1155 ntTSL 5 BASIC15.68■□□□□ 0.1
CHPFQ8IZ52 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC15.68■□□□□ 0.1
CHPFQ8IZ52 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CHPFQ8IZ52 FAM197Y7-201ENST00000432892 766 ntBASIC15.68■□□□□ 0.1
CHPFQ8IZ52 RPL13AP20-201ENST00000459725 609 ntBASIC15.68■□□□□ 0.1
CHPFQ8IZ52 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CHPFQ8IZ52 AC108725.1-201ENST00000495472 409 ntBASIC15.68■□□□□ 0.1
CHPFQ8IZ52 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC15.68■□□□□ 0.1
CHPFQ8IZ52 RIT1-205ENST00000539040 919 ntTSL 2 BASIC15.68■□□□□ 0.1
CHPFQ8IZ52 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC15.68■□□□□ 0.1
CHPFQ8IZ52 DERL2-202ENST00000570848 657 ntTSL 5 BASIC15.68■□□□□ 0.1
CHPFQ8IZ52 RN7SL560P-201ENST00000577943 264 ntBASIC15.68■□□□□ 0.1
CHPFQ8IZ52 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
CHPFQ8IZ52 AC025181.2-201ENST00000606994 802 ntBASIC15.68■□□□□ 0.1
CHPFQ8IZ52 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC15.68■□□□□ 0.1
CHPFQ8IZ52 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC15.68■□□□□ 0.1
CHPFQ8IZ52 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CHPFQ8IZ52 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC15.68■□□□□ 0.1
CHPFQ8IZ52 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC15.68■□□□□ 0.1
CHPFQ8IZ52 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CHPFQ8IZ52 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
CHPFQ8IZ52 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC15.68■□□□□ 0.1
CHPFQ8IZ52 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CHPFQ8IZ52 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC15.68■□□□□ 0.1
CHPFQ8IZ52 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CHPFQ8IZ52 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CHPFQ8IZ52 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CHPFQ8IZ52 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CHPFQ8IZ52 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
CHPFQ8IZ52 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
CHPFQ8IZ52 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CHPFQ8IZ52 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
CHPFQ8IZ52 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
CHPFQ8IZ52 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC15.67■□□□□ 0.1
CHPFQ8IZ52 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CHPFQ8IZ52 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC15.67■□□□□ 0.1
CHPFQ8IZ52 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CHPFQ8IZ52 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
CHPFQ8IZ52 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC15.67■□□□□ 0.1
CHPFQ8IZ52 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
CHPFQ8IZ52 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC15.67■□□□□ 0.1
CHPFQ8IZ52 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CHPFQ8IZ52 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
CHPFQ8IZ52 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC15.67■□□□□ 0.1
CHPFQ8IZ52 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC15.67■□□□□ 0.1
CHPFQ8IZ52 HLA-DQB2-231ENST00000435145 2026 ntBASIC15.67■□□□□ 0.1
CHPFQ8IZ52 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
CHPFQ8IZ52 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC15.67■□□□□ 0.1
CHPFQ8IZ52 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC15.67■□□□□ 0.1
CHPFQ8IZ52 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
CHPFQ8IZ52 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CHPFQ8IZ52 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
CHPFQ8IZ52 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CHPFQ8IZ52 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
CHPFQ8IZ52 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CHPFQ8IZ52 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC15.67■□□□□ 0.1
CHPFQ8IZ52 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC15.67■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 54.7 ms